Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0509 and Psyr_0510 are separated by 32 nucleotides Psyr_0510 and Psyr_0511 are separated by 26 nucleotides Psyr_0511 and Psyr_0512 are separated by 7 nucleotides
Psyr_0509: Psyr_0509 - PAS:GGDEF, at 564,626 to 566,785
_0509
Psyr_0510: Psyr_0510 - conserved hypothetical protein, at 566,818 to 567,342
_0510
Psyr_0511: Psyr_0511 - conserved hypothetical protein, at 567,369 to 567,665
_0511
Psyr_0512: Psyr_0512 - GCN5-related N-acetyltransferase, at 567,673 to 568,131
_0512
Position (kb) 566
567
568 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.916 kb on + strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.917 kb on - strand, within Psyr_0509 at 565.955 kb on + strand, within Psyr_0509 at 565.956 kb on - strand, within Psyr_0509 at 566.048 kb on + strand, within Psyr_0509 at 566.048 kb on + strand, within Psyr_0509 at 566.048 kb on + strand, within Psyr_0509 at 566.049 kb on - strand, within Psyr_0509 at 566.049 kb on - strand, within Psyr_0509 at 566.049 kb on - strand, within Psyr_0509 at 566.358 kb on + strand, within Psyr_0509 at 566.359 kb on - strand, within Psyr_0509 at 566.359 kb on - strand, within Psyr_0509 at 566.545 kb on + strand, within Psyr_0509 at 566.584 kb on + strand at 566.585 kb on - strand at 566.783 kb on + strand at 566.783 kb on + strand at 566.783 kb on + strand at 566.784 kb on - strand at 566.784 kb on - strand at 566.784 kb on - strand at 566.784 kb on - strand at 566.849 kb on - strand at 566.921 kb on - strand, within Psyr_0510 at 566.974 kb on + strand, within Psyr_0510 at 567.239 kb on - strand, within Psyr_0510 at 567.239 kb on - strand, within Psyr_0510 at 567.239 kb on - strand, within Psyr_0510 at 567.239 kb on - strand, within Psyr_0510 at 567.299 kb on - strand at 567.308 kb on - strand at 567.399 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.412 kb on - strand, within Psyr_0511 at 567.420 kb on + strand, within Psyr_0511 at 567.421 kb on - strand, within Psyr_0511 at 567.503 kb on + strand, within Psyr_0511 at 567.504 kb on - strand, within Psyr_0511 at 567.658 kb on - strand at 567.758 kb on + strand, within Psyr_0512 at 567.761 kb on + strand, within Psyr_0512 at 567.761 kb on + strand, within Psyr_0512 at 567.762 kb on - strand, within Psyr_0512 at 567.787 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 568.022 kb on + strand, within Psyr_0512 at 568.023 kb on - strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.166 kb on + strand at 568.166 kb on + strand at 568.167 kb on - strand at 568.172 kb on + strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.275 kb on + strand at 568.275 kb on + strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.323 kb on - strand at 568.323 kb on - strand at 568.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 565,916 + Psyr_0509 0.60 +2.9 565,916 + Psyr_0509 0.60 +4.5 565,916 + Psyr_0509 0.60 -3.0 565,916 + Psyr_0509 0.60 -1.2 565,916 + Psyr_0509 0.60 +2.7 565,916 + Psyr_0509 0.60 +0.4 565,916 + Psyr_0509 0.60 -0.1 565,917 - Psyr_0509 0.60 -1.8 565,917 - Psyr_0509 0.60 -2.7 565,917 - Psyr_0509 0.60 +1.0 565,917 - Psyr_0509 0.60 +2.7 565,917 - Psyr_0509 0.60 +0.3 565,917 - Psyr_0509 0.60 -1.1 565,955 + Psyr_0509 0.62 -2.5 565,956 - Psyr_0509 0.62 -0.4 566,048 + Psyr_0509 0.66 +1.0 566,048 + Psyr_0509 0.66 -0.9 566,048 + Psyr_0509 0.66 -0.1 566,049 - Psyr_0509 0.66 +3.5 566,049 - Psyr_0509 0.66 -0.1 566,049 - Psyr_0509 0.66 -3.0 566,358 + Psyr_0509 0.80 +5.1 566,359 - Psyr_0509 0.80 +0.1 566,359 - Psyr_0509 0.80 -0.8 566,545 + Psyr_0509 0.89 -0.4 566,584 + +0.7 566,585 - +4.5 566,783 + -1.9 566,783 + -1.8 566,783 + -3.0 566,784 - -0.2 566,784 - -0.1 566,784 - -2.6 566,784 - -2.8 566,849 - -0.1 566,921 - Psyr_0510 0.20 -0.9 566,974 + Psyr_0510 0.30 -0.1 567,239 - Psyr_0510 0.80 -0.1 567,239 - Psyr_0510 0.80 -0.7 567,239 - Psyr_0510 0.80 -1.4 567,239 - Psyr_0510 0.80 -2.5 567,299 - -1.0 567,308 - +2.5 567,399 + Psyr_0511 0.10 -2.3 567,411 + Psyr_0511 0.14 -0.9 567,411 + Psyr_0511 0.14 -3.0 567,411 + Psyr_0511 0.14 -1.3 567,412 - Psyr_0511 0.14 -1.1 567,420 + Psyr_0511 0.17 +1.9 567,421 - Psyr_0511 0.18 -0.2 567,503 + Psyr_0511 0.45 +3.1 567,504 - Psyr_0511 0.45 -0.9 567,658 - -2.0 567,758 + Psyr_0512 0.19 +1.9 567,761 + Psyr_0512 0.19 +1.9 567,761 + Psyr_0512 0.19 +1.3 567,762 - Psyr_0512 0.19 +3.3 567,787 + Psyr_0512 0.25 +2.5 567,791 + Psyr_0512 0.26 +0.3 567,791 + Psyr_0512 0.26 -2.7 567,791 + Psyr_0512 0.26 -3.1 567,791 + Psyr_0512 0.26 -1.2 567,791 + Psyr_0512 0.26 -0.5 567,791 + Psyr_0512 0.26 -0.4 567,791 + Psyr_0512 0.26 -2.0 567,791 + Psyr_0512 0.26 -3.2 567,791 + Psyr_0512 0.26 -3.9 567,791 + Psyr_0512 0.26 -3.2 567,791 + Psyr_0512 0.26 +1.6 567,792 - Psyr_0512 0.26 -1.9 567,792 - Psyr_0512 0.26 -2.8 567,792 - Psyr_0512 0.26 +0.9 567,792 - Psyr_0512 0.26 -0.2 567,792 - Psyr_0512 0.26 -0.9 567,792 - Psyr_0512 0.26 -3.8 567,792 - Psyr_0512 0.26 -0.2 567,792 - Psyr_0512 0.26 +1.5 568,022 + Psyr_0512 0.76 -0.7 568,023 - Psyr_0512 0.76 +3.9 568,076 + Psyr_0512 0.88 -2.5 568,076 + Psyr_0512 0.88 -1.4 568,076 + Psyr_0512 0.88 -0.6 568,076 + Psyr_0512 0.88 +1.2 568,076 + Psyr_0512 0.88 -0.8 568,077 - Psyr_0512 0.88 -3.2 568,077 - Psyr_0512 0.88 -1.3 568,077 - Psyr_0512 0.88 -0.9 568,166 + -3.2 568,166 + +0.7 568,167 - +1.5 568,172 + -4.8 568,252 - -0.1 568,252 - +0.7 568,252 - +3.4 568,275 + -2.4 568,275 + +0.2 568,276 - -1.1 568,276 - +2.3 568,276 - -1.0 568,322 + +3.9 568,322 + +4.0 568,322 + +4.0 568,323 - +2.5 568,323 - -2.4 568,323 - +1.5
Or see this region's nucleotide sequence