Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0492 and Psyr_0493 overlap by 8 nucleotides Psyr_0493 and Psyr_0494 are separated by 121 nucleotides Psyr_0494 and Psyr_0495 are separated by 138 nucleotides
Psyr_0492: Psyr_0492 - Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt, at 528,991 to 534,969
_0492
Psyr_0493: Psyr_0493 - CheW-like protein, at 534,962 to 535,432
_0493
Psyr_0494: Psyr_0494 - Protein of unknown function UPF0061, at 535,554 to 537,017
_0494
Psyr_0495: Psyr_0495 - transcriptional regulator, GntR family, at 537,156 to 537,905
_0495
Position (kb) 535
536
537
538 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 534.645 kb on + strand at 534.898 kb on + strand at 534.899 kb on - strand at 535.115 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.430 kb on + strand at 535.430 kb on + strand at 535.430 kb on + strand at 535.431 kb on - strand at 535.435 kb on - strand at 535.486 kb on + strand at 535.486 kb on + strand at 535.486 kb on + strand at 535.487 kb on - strand at 535.490 kb on + strand at 535.540 kb on - strand at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.721 kb on - strand, within Psyr_0494 at 535.721 kb on - strand, within Psyr_0494 at 535.735 kb on + strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.802 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.922 kb on - strand, within Psyr_0494 at 536.026 kb on + strand, within Psyr_0494 at 536.027 kb on - strand, within Psyr_0494 at 536.038 kb on + strand, within Psyr_0494 at 536.241 kb on - strand, within Psyr_0494 at 536.293 kb on + strand, within Psyr_0494 at 536.294 kb on - strand, within Psyr_0494 at 536.356 kb on + strand, within Psyr_0494 at 536.443 kb on + strand, within Psyr_0494 at 536.443 kb on + strand, within Psyr_0494 at 536.444 kb on - strand, within Psyr_0494 at 536.444 kb on - strand, within Psyr_0494 at 536.452 kb on + strand, within Psyr_0494 at 536.452 kb on + strand, within Psyr_0494 at 536.453 kb on - strand, within Psyr_0494 at 536.453 kb on - strand, within Psyr_0494 at 536.453 kb on - strand, within Psyr_0494 at 536.716 kb on + strand, within Psyr_0494 at 536.717 kb on - strand, within Psyr_0494 at 536.717 kb on - strand, within Psyr_0494 at 536.717 kb on - strand, within Psyr_0494 at 536.764 kb on + strand, within Psyr_0494 at 536.765 kb on - strand, within Psyr_0494 at 536.765 kb on - strand, within Psyr_0494 at 536.788 kb on + strand, within Psyr_0494 at 536.910 kb on + strand at 536.914 kb on - strand at 537.127 kb on + strand at 537.127 kb on + strand at 537.127 kb on + strand at 537.127 kb on + strand at 537.128 kb on - strand at 537.128 kb on - strand at 537.214 kb on + strand at 537.214 kb on + strand at 537.215 kb on - strand at 537.293 kb on - strand, within Psyr_0495 at 537.364 kb on + strand, within Psyr_0495 at 537.365 kb on - strand, within Psyr_0495 at 537.365 kb on - strand, within Psyr_0495 at 537.365 kb on - strand, within Psyr_0495 at 537.520 kb on + strand, within Psyr_0495 at 537.520 kb on + strand, within Psyr_0495 at 537.566 kb on - strand, within Psyr_0495 at 537.569 kb on + strand, within Psyr_0495 at 537.570 kb on - strand, within Psyr_0495 at 537.651 kb on + strand, within Psyr_0495 at 537.652 kb on - strand, within Psyr_0495 at 537.674 kb on + strand, within Psyr_0495 at 537.674 kb on + strand, within Psyr_0495 at 537.803 kb on + strand, within Psyr_0495 at 537.804 kb on - strand, within Psyr_0495 at 537.821 kb on + strand, within Psyr_0495 at 537.910 kb on + strand at 537.967 kb on - strand at 537.981 kb on + strand at 537.982 kb on - strand at 537.995 kb on - strand at 537.995 kb on - strand at 537.998 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 534,645 + +3.1 534,898 + -2.6 534,899 - +0.9 535,115 + Psyr_0493 0.32 -0.4 535,313 + Psyr_0493 0.75 -4.8 535,313 + Psyr_0493 0.75 -0.1 535,313 + Psyr_0493 0.75 -3.5 535,314 - Psyr_0493 0.75 -3.0 535,314 - Psyr_0493 0.75 +2.3 535,430 + +2.7 535,430 + -2.8 535,430 + -0.9 535,431 - -3.2 535,435 - -0.1 535,486 + +1.9 535,486 + -0.1 535,486 + -1.7 535,487 - -0.5 535,490 + -1.7 535,540 - +4.1 535,720 + Psyr_0494 0.11 +3.1 535,720 + Psyr_0494 0.11 +0.9 535,720 + Psyr_0494 0.11 +0.6 535,720 + Psyr_0494 0.11 -2.4 535,720 + Psyr_0494 0.11 +2.3 535,720 + Psyr_0494 0.11 +2.9 535,721 - Psyr_0494 0.11 -0.8 535,721 - Psyr_0494 0.11 -3.2 535,735 + Psyr_0494 0.12 +0.6 535,736 - Psyr_0494 0.12 +2.5 535,736 - Psyr_0494 0.12 +0.9 535,802 + Psyr_0494 0.17 -0.6 535,921 + Psyr_0494 0.25 +2.5 535,921 + Psyr_0494 0.25 +2.4 535,921 + Psyr_0494 0.25 -2.9 535,921 + Psyr_0494 0.25 -4.6 535,922 - Psyr_0494 0.25 -1.4 536,026 + Psyr_0494 0.32 +0.1 536,027 - Psyr_0494 0.32 -0.1 536,038 + Psyr_0494 0.33 +0.9 536,241 - Psyr_0494 0.47 +3.1 536,293 + Psyr_0494 0.50 +2.9 536,294 - Psyr_0494 0.51 +3.8 536,356 + Psyr_0494 0.55 -0.9 536,443 + Psyr_0494 0.61 -4.9 536,443 + Psyr_0494 0.61 -1.6 536,444 - Psyr_0494 0.61 -0.2 536,444 - Psyr_0494 0.61 -0.5 536,452 + Psyr_0494 0.61 -1.7 536,452 + Psyr_0494 0.61 -0.2 536,453 - Psyr_0494 0.61 -4.2 536,453 - Psyr_0494 0.61 -2.6 536,453 - Psyr_0494 0.61 -1.1 536,716 + Psyr_0494 0.79 +2.3 536,717 - Psyr_0494 0.79 -1.7 536,717 - Psyr_0494 0.79 -0.9 536,717 - Psyr_0494 0.79 -0.9 536,764 + Psyr_0494 0.83 -2.4 536,765 - Psyr_0494 0.83 +1.5 536,765 - Psyr_0494 0.83 +0.2 536,788 + Psyr_0494 0.84 +1.1 536,910 + -0.1 536,914 - -0.7 537,127 + -2.4 537,127 + +3.9 537,127 + -1.0 537,127 + +2.7 537,128 - -1.8 537,128 - -2.4 537,214 + -0.9 537,214 + -1.4 537,215 - +0.5 537,293 - Psyr_0495 0.18 +2.3 537,364 + Psyr_0495 0.28 -2.0 537,365 - Psyr_0495 0.28 -0.7 537,365 - Psyr_0495 0.28 -0.2 537,365 - Psyr_0495 0.28 +3.1 537,520 + Psyr_0495 0.49 +3.3 537,520 + Psyr_0495 0.49 -2.2 537,566 - Psyr_0495 0.55 +0.6 537,569 + Psyr_0495 0.55 -1.4 537,570 - Psyr_0495 0.55 +3.6 537,651 + Psyr_0495 0.66 +1.5 537,652 - Psyr_0495 0.66 -1.7 537,674 + Psyr_0495 0.69 +0.9 537,674 + Psyr_0495 0.69 +1.1 537,803 + Psyr_0495 0.86 -2.2 537,804 - Psyr_0495 0.86 -0.0 537,821 + Psyr_0495 0.89 -1.8 537,910 + -1.2 537,967 - +0.5 537,981 + -3.0 537,982 - -0.1 537,995 - -0.7 537,995 - -3.1 537,998 + -0.7
Or see this region's nucleotide sequence