Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0422 and Psyr_0423 overlap by 1 nucleotides Psyr_0423 and Psyr_0424 overlap by 4 nucleotides Psyr_0424 and Psyr_0425 overlap by 4 nucleotides
Psyr_0422: Psyr_0422 - Beta-ketoacyl synthase:Beta-ketoacyl synthase, at 461,547 to 462,773
_0422
Psyr_0423: Psyr_0423 - 3-oxoacyl-(acyl-carrier-protein) reductase, putative, at 462,773 to 463,501
_0423
Psyr_0424: Psyr_0424 - conserved hypothetical protein, at 463,498 to 463,953
_0424
Psyr_0425: Psyr_0425 - Beta-ketoacyl synthase:Beta-ketoacyl synthase, at 463,950 to 465,146
_0425
Position (kb) 463
464 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 462.636 kb on - strand, within Psyr_0422 at 462.816 kb on + strand at 462.816 kb on + strand at 462.816 kb on + strand at 462.816 kb on + strand at 462.816 kb on + strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 462.817 kb on - strand at 463.022 kb on - strand, within Psyr_0423 at 463.044 kb on + strand, within Psyr_0423 at 463.044 kb on + strand, within Psyr_0423 at 463.045 kb on - strand, within Psyr_0423 at 463.112 kb on - strand, within Psyr_0423 at 463.153 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.155 kb on + strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.156 kb on - strand, within Psyr_0423 at 463.258 kb on - strand, within Psyr_0423 at 463.260 kb on + strand, within Psyr_0423 at 463.261 kb on - strand, within Psyr_0423 at 463.523 kb on + strand at 463.547 kb on + strand, within Psyr_0424 at 463.548 kb on - strand, within Psyr_0424 at 463.548 kb on - strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.549 kb on + strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 463.550 kb on - strand, within Psyr_0424 at 464.017 kb on + strand at 464.017 kb on + strand at 464.018 kb on - strand at 464.018 kb on - strand at 464.018 kb on - strand at 464.239 kb on - strand, within Psyr_0425 at 464.239 kb on - strand, within Psyr_0425 at 464.305 kb on + strand, within Psyr_0425 at 464.495 kb on + strand, within Psyr_0425 at 464.695 kb on + strand, within Psyr_0425 at 464.695 kb on + strand, within Psyr_0425 at 464.696 kb on - strand, within Psyr_0425
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 462,636 - Psyr_0422 0.89 +2.5 462,816 + -2.6 462,816 + +0.1 462,816 + +0.2 462,816 + -2.7 462,816 + -1.8 462,817 - +0.3 462,817 - +1.5 462,817 - -0.1 462,817 - +1.1 462,817 - +2.9 462,817 - -2.9 462,817 - -0.0 462,817 - -3.3 462,817 - -1.7 463,022 - Psyr_0423 0.34 +0.2 463,044 + Psyr_0423 0.37 -0.7 463,044 + Psyr_0423 0.37 -0.1 463,045 - Psyr_0423 0.37 +0.2 463,112 - Psyr_0423 0.47 +2.5 463,153 + Psyr_0423 0.52 -0.9 463,155 + Psyr_0423 0.52 -0.1 463,155 + Psyr_0423 0.52 -3.3 463,155 + Psyr_0423 0.52 -5.0 463,155 + Psyr_0423 0.52 +1.5 463,155 + Psyr_0423 0.52 -0.8 463,155 + Psyr_0423 0.52 +1.5 463,156 - Psyr_0423 0.53 -1.9 463,156 - Psyr_0423 0.53 -0.6 463,156 - Psyr_0423 0.53 -0.3 463,156 - Psyr_0423 0.53 +2.2 463,156 - Psyr_0423 0.53 -1.6 463,156 - Psyr_0423 0.53 -0.7 463,156 - Psyr_0423 0.53 -0.4 463,156 - Psyr_0423 0.53 -1.5 463,156 - Psyr_0423 0.53 +3.6 463,258 - Psyr_0423 0.67 -0.1 463,260 + Psyr_0423 0.67 +2.2 463,261 - Psyr_0423 0.67 -0.5 463,523 + +4.2 463,547 + Psyr_0424 0.11 -3.3 463,548 - Psyr_0424 0.11 -1.8 463,548 - Psyr_0424 0.11 -3.2 463,549 + Psyr_0424 0.11 -0.1 463,549 + Psyr_0424 0.11 +1.0 463,549 + Psyr_0424 0.11 +2.2 463,549 + Psyr_0424 0.11 -1.5 463,549 + Psyr_0424 0.11 -1.2 463,549 + Psyr_0424 0.11 +3.1 463,549 + Psyr_0424 0.11 -1.2 463,549 + Psyr_0424 0.11 -0.9 463,549 + Psyr_0424 0.11 -0.1 463,549 + Psyr_0424 0.11 +3.5 463,549 + Psyr_0424 0.11 -1.4 463,549 + Psyr_0424 0.11 -0.9 463,549 + Psyr_0424 0.11 -1.5 463,549 + Psyr_0424 0.11 -0.2 463,549 + Psyr_0424 0.11 +3.7 463,549 + Psyr_0424 0.11 -0.1 463,549 + Psyr_0424 0.11 -0.1 463,549 + Psyr_0424 0.11 -4.0 463,549 + Psyr_0424 0.11 -1.5 463,549 + Psyr_0424 0.11 -1.5 463,549 + Psyr_0424 0.11 -0.9 463,549 + Psyr_0424 0.11 -0.1 463,550 - Psyr_0424 0.11 -0.8 463,550 - Psyr_0424 0.11 +3.6 463,550 - Psyr_0424 0.11 -1.7 463,550 - Psyr_0424 0.11 -4.1 463,550 - Psyr_0424 0.11 -2.6 463,550 - Psyr_0424 0.11 -0.8 463,550 - Psyr_0424 0.11 -0.1 463,550 - Psyr_0424 0.11 -1.8 463,550 - Psyr_0424 0.11 -1.4 463,550 - Psyr_0424 0.11 -1.2 463,550 - Psyr_0424 0.11 -0.2 463,550 - Psyr_0424 0.11 +2.7 463,550 - Psyr_0424 0.11 -3.0 463,550 - Psyr_0424 0.11 -2.0 463,550 - Psyr_0424 0.11 +0.0 463,550 - Psyr_0424 0.11 -0.9 463,550 - Psyr_0424 0.11 -1.1 463,550 - Psyr_0424 0.11 +3.2 464,017 + +2.2 464,017 + -1.0 464,018 - +3.9 464,018 - -3.8 464,018 - -0.8 464,239 - Psyr_0425 0.24 -2.4 464,239 - Psyr_0425 0.24 +0.4 464,305 + Psyr_0425 0.30 +0.1 464,495 + Psyr_0425 0.46 -0.1 464,695 + Psyr_0425 0.62 -1.6 464,695 + Psyr_0425 0.62 -1.8 464,696 - Psyr_0425 0.62 -1.0
Or see this region's nucleotide sequence