Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0367 and Psyr_0368 are separated by 180 nucleotides Psyr_0368 and Psyr_0369 are separated by 3 nucleotides Psyr_0369 and Psyr_0370 are separated by 251 nucleotides
Psyr_0367: Psyr_0367 - formimidoylglutamate deiminase, at 391,324 to 392,688
_0367
Psyr_0368: Psyr_0368 - lipoprotein Blc, at 392,869 to 393,447
_0368
Psyr_0369: Psyr_0369 - lipoprotein, putative, at 393,451 to 393,705
_0369
Psyr_0370: Psyr_0370 - D-fructose 1,6-bisphosphatase, at 393,957 to 394,967
_0370
Position (kb) 393
394 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 392.512 kb on + strand, within Psyr_0367 at 392.512 kb on + strand, within Psyr_0367 at 392.513 kb on - strand, within Psyr_0367 at 392.513 kb on - strand, within Psyr_0367 at 392.513 kb on - strand, within Psyr_0367 at 392.930 kb on + strand, within Psyr_0368 at 392.931 kb on - strand, within Psyr_0368 at 392.991 kb on + strand, within Psyr_0368 at 392.992 kb on - strand, within Psyr_0368 at 392.992 kb on - strand, within Psyr_0368 at 393.011 kb on + strand, within Psyr_0368 at 393.011 kb on + strand, within Psyr_0368 at 393.011 kb on + strand, within Psyr_0368 at 393.011 kb on + strand, within Psyr_0368 at 393.012 kb on - strand, within Psyr_0368 at 393.012 kb on - strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.249 kb on + strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.250 kb on - strand, within Psyr_0368 at 393.327 kb on - strand, within Psyr_0368 at 393.430 kb on + strand at 393.452 kb on + strand at 393.453 kb on - strand at 393.453 kb on - strand at 393.497 kb on + strand, within Psyr_0369 at 393.498 kb on - strand, within Psyr_0369 at 393.510 kb on + strand, within Psyr_0369 at 393.510 kb on + strand, within Psyr_0369 at 393.511 kb on - strand, within Psyr_0369 at 393.629 kb on + strand, within Psyr_0369 at 393.629 kb on + strand, within Psyr_0369 at 393.682 kb on + strand at 393.683 kb on - strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.711 kb on + strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.712 kb on - strand at 393.785 kb on + strand at 393.785 kb on + strand at 393.786 kb on - strand at 393.786 kb on - strand at 393.786 kb on - strand at 393.829 kb on + strand at 393.845 kb on + strand at 393.845 kb on + strand at 393.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 392,512 + Psyr_0367 0.87 -1.3 392,512 + Psyr_0367 0.87 +0.0 392,513 - Psyr_0367 0.87 -1.3 392,513 - Psyr_0367 0.87 +3.1 392,513 - Psyr_0367 0.87 +0.5 392,930 + Psyr_0368 0.11 +3.1 392,931 - Psyr_0368 0.11 -1.9 392,991 + Psyr_0368 0.21 +2.5 392,992 - Psyr_0368 0.21 -1.4 392,992 - Psyr_0368 0.21 +3.1 393,011 + Psyr_0368 0.25 +0.9 393,011 + Psyr_0368 0.25 -1.4 393,011 + Psyr_0368 0.25 +3.6 393,011 + Psyr_0368 0.25 -3.1 393,012 - Psyr_0368 0.25 -2.3 393,012 - Psyr_0368 0.25 -0.7 393,249 + Psyr_0368 0.66 +2.7 393,249 + Psyr_0368 0.66 -2.2 393,249 + Psyr_0368 0.66 -1.4 393,249 + Psyr_0368 0.66 -2.5 393,249 + Psyr_0368 0.66 +3.2 393,249 + Psyr_0368 0.66 +0.9 393,249 + Psyr_0368 0.66 -0.1 393,249 + Psyr_0368 0.66 -1.2 393,249 + Psyr_0368 0.66 +3.2 393,249 + Psyr_0368 0.66 -1.1 393,249 + Psyr_0368 0.66 -0.1 393,250 - Psyr_0368 0.66 -1.8 393,250 - Psyr_0368 0.66 +4.4 393,250 - Psyr_0368 0.66 -1.8 393,250 - Psyr_0368 0.66 +0.1 393,250 - Psyr_0368 0.66 +0.8 393,250 - Psyr_0368 0.66 -1.6 393,250 - Psyr_0368 0.66 +2.9 393,250 - Psyr_0368 0.66 -0.1 393,250 - Psyr_0368 0.66 -1.4 393,250 - Psyr_0368 0.66 +1.5 393,250 - Psyr_0368 0.66 +4.8 393,327 - Psyr_0368 0.79 -0.6 393,430 + -0.9 393,452 + -2.5 393,453 - -0.1 393,453 - +2.2 393,497 + Psyr_0369 0.18 -0.5 393,498 - Psyr_0369 0.18 +0.9 393,510 + Psyr_0369 0.23 +0.5 393,510 + Psyr_0369 0.23 +3.2 393,511 - Psyr_0369 0.24 +0.7 393,629 + Psyr_0369 0.70 -4.6 393,629 + Psyr_0369 0.70 +0.5 393,682 + +0.6 393,683 - +2.2 393,711 + -2.3 393,711 + -1.7 393,711 + +1.5 393,711 + -1.2 393,711 + -1.5 393,711 + -1.0 393,711 + +0.5 393,711 + -0.1 393,711 + +4.6 393,711 + +4.8 393,711 + -1.2 393,711 + -1.2 393,711 + -0.7 393,711 + -1.9 393,711 + +1.9 393,711 + +1.2 393,711 + -1.4 393,712 - -1.5 393,712 - +0.9 393,712 - -0.4 393,712 - +2.5 393,712 - -2.4 393,712 - +3.4 393,712 - +0.9 393,712 - +4.1 393,712 - +2.2 393,712 - +3.9 393,712 - +0.4 393,712 - -0.8 393,785 + -1.2 393,785 + +0.1 393,786 - +2.7 393,786 - -1.7 393,786 - +2.2 393,829 + -0.6 393,845 + -0.9 393,845 + -1.2 393,959 - +0.6
Or see this region's nucleotide sequence