Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0140

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
150,525	+		Psyr_0139	0.57	-2.0
150,526	-		Psyr_0139	0.57	+0.9
150,526	-		Psyr_0139	0.57	-0.1
150,543	+		Psyr_0139	0.58	-0.5
150,543	+		Psyr_0139	0.58	+0.4
150,543	+		Psyr_0139	0.58	-2.1
150,543	+		Psyr_0139	0.58	+0.8
150,543	+		Psyr_0139	0.58	+0.0
150,543	+		Psyr_0139	0.58	+0.9
150,543	+		Psyr_0139	0.58	+0.9
150,543	+		Psyr_0139	0.58	+0.9
150,543	+		Psyr_0139	0.58	-3.6
150,544	-		Psyr_0139	0.58	+0.4
150,544	-		Psyr_0139	0.58	-1.6
150,544	-		Psyr_0139	0.58	+0.4
150,544	-		Psyr_0139	0.58	-0.9
150,544	-		Psyr_0139	0.58	-0.1
150,544	-		Psyr_0139	0.58	+2.2
150,651	+		Psyr_0139	0.63	+3.1
150,652	-		Psyr_0139	0.63	-0.1
150,894	+		Psyr_0139	0.76	+2.5
150,894	+		Psyr_0139	0.76	-4.0
150,894	+		Psyr_0139	0.76	-4.2
150,894	+		Psyr_0139	0.76	-0.1
150,895	-		Psyr_0139	0.76	-1.4
150,895	-		Psyr_0139	0.76	-2.1
150,895	-		Psyr_0139	0.76	-1.8
150,895	-		Psyr_0139	0.76	-0.5
150,921	+		Psyr_0139	0.78	+1.5
150,987	+		Psyr_0139	0.81	+0.9
150,987	+		Psyr_0139	0.81	-0.4
150,987	+		Psyr_0139	0.81	-1.5
150,988	-		Psyr_0139	0.81	-3.4
150,988	-		Psyr_0139	0.81	-0.8
150,988	-		Psyr_0139	0.81	+4.2
150,988	-		Psyr_0139	0.81	+3.8
150,988	-		Psyr_0139	0.81	-2.6
150,988	-		Psyr_0139	0.81	+3.2
150,996	+		Psyr_0139	0.82	+2.2
151,117	-		Psyr_0139	0.88	-2.4
151,152	+				-1.7
151,155	+				-2.2
151,155	+				+0.9
151,155	+				+3.2
151,155	+				+2.7
151,155	+				+3.6
151,155	+				-0.1
151,155	+				+0.4
151,155	+				-0.7
151,155	+				-2.7
151,155	+				+3.1
151,155	+				-4.8
151,155	+				+1.5
151,155	+				-2.0
151,155	+				-2.3
151,155	+				+3.4
151,155	+				+1.5
151,155	+				-2.8
151,156	-				+1.5
151,156	-				-3.9
151,156	-				+0.9
151,156	-				-1.9
151,156	-				+0.5
151,156	-				-1.7
151,156	-				-0.4
151,156	-				-0.3
151,156	-				-1.1
151,156	-				-0.2
151,156	-				+3.4
151,156	-				-4.7
151,156	-				+0.9
151,156	-				-0.2
151,156	-				+1.9
151,156	-				-1.3
151,156	-				-1.3
151,156	-				-0.1
151,156	-				+4.0
151,156	-				-0.5
151,156	-				+3.7
151,156	-				+4.1
151,156	-				+0.1
151,170	+				+3.5
151,170	+				-0.5
151,170	+				-0.1
151,170	+				-0.2
151,170	+				-2.2
151,170	+				-2.1
151,170	+				+0.9
151,170	+				+1.9
151,171	-				+3.9
151,171	-				+2.0
151,171	-				-0.8
151,171	-				-2.9
151,171	-				+4.2
151,171	-				-0.6
151,171	-				+0.2
151,171	-				-2.1
151,173	+				+0.2
151,236	+				-0.4
151,236	+				-1.4
151,236	+				-0.8
151,236	+				-3.0
151,237	-				-2.0
151,336	-				-0.4
151,336	-				+3.4
151,351	+				-0.1
151,351	+				-3.8
151,352	-				+2.5
151,352	-				+1.5
151,585	+		Psyr_0140	0.23	+0.4
151,586	-		Psyr_0140	0.23	-2.7
151,636	+		Psyr_0140	0.28	-0.6
151,636	+		Psyr_0140	0.28	-1.4
151,637	-		Psyr_0140	0.28	-1.5
151,750	+		Psyr_0140	0.38	-1.6
151,900	+		Psyr_0140	0.52	-1.3
151,900	+		Psyr_0140	0.52	-2.5
151,900	+		Psyr_0140	0.52	-1.5
151,900	+		Psyr_0140	0.52	+0.3
151,900	+		Psyr_0140	0.52	+3.9
151,900	+		Psyr_0140	0.52	-2.5
151,901	-		Psyr_0140	0.52	+3.9
151,901	-		Psyr_0140	0.52	+0.3
151,978	+		Psyr_0140	0.60	-1.3
151,978	+		Psyr_0140	0.60	-1.3
151,978	+		Psyr_0140	0.60	-0.3
151,978	+		Psyr_0140	0.60	-2.0
151,979	-		Psyr_0140	0.60	+1.9
151,979	-		Psyr_0140	0.60	-1.5
152,083	+		Psyr_0140	0.69	-0.3
152,131	+		Psyr_0140	0.74	-1.8
152,256	+		Psyr_0140	0.86	+2.7
152,256	+		Psyr_0140	0.86	+0.9
152,257	-		Psyr_0140	0.86	-0.6
152,362	+				+3.1
152,363	-				+3.4
152,363	-				-2.1
152,574	+		Psyr_0141	0.16	-0.1
152,574	+		Psyr_0141	0.16	-2.6
152,574	+		Psyr_0141	0.16	+2.2
152,574	+		Psyr_0141	0.16	+0.6
152,574	+		Psyr_0141	0.16	+2.9
152,574	+		Psyr_0141	0.16	+0.3
152,574	+		Psyr_0141	0.16	-1.3
152,574	+		Psyr_0141	0.16	-0.8
152,575	-		Psyr_0141	0.16	+3.2
152,575	-		Psyr_0141	0.16	-2.4
152,575	-		Psyr_0141	0.16	+1.3
152,575	-		Psyr_0141	0.16	-2.0
152,575	-		Psyr_0141	0.16	-1.9
152,595	+		Psyr_0141	0.18	-1.2
152,595	+		Psyr_0141	0.18	-1.1
152,595	+		Psyr_0141	0.18	+3.4
152,595	+		Psyr_0141	0.18	-3.7
152,595	+		Psyr_0141	0.18	-4.9
152,595	+		Psyr_0141	0.18	+2.5
152,595	+		Psyr_0141	0.18	+0.0
152,595	+		Psyr_0141	0.18	+0.7
152,595	+		Psyr_0141	0.18	-1.7
152,596	-		Psyr_0141	0.18	-3.8
152,596	-		Psyr_0141	0.18	-2.0
152,596	-		Psyr_0141	0.18	-2.3
152,596	-		Psyr_0141	0.18	+0.9
152,596	-		Psyr_0141	0.18	-1.5
152,596	-		Psyr_0141	0.18	+0.0
152,596	-		Psyr_0141	0.18	+0.9
152,596	-		Psyr_0141	0.18	+1.5
152,596	-		Psyr_0141	0.18	-0.1
152,596	-		Psyr_0141	0.18	-3.1
152,596	-		Psyr_0141	0.18	-1.4
152,640	+		Psyr_0141	0.23	+4.1
152,641	-		Psyr_0141	0.23	-0.6
152,652	+		Psyr_0141	0.24	+0.0
152,652	+		Psyr_0141	0.24	-0.1
152,653	-		Psyr_0141	0.24	-4.2
152,653	-		Psyr_0141	0.24	-1.7
152,653	-		Psyr_0141	0.24	-1.3
152,653	-		Psyr_0141	0.24	-4.0
152,653	-		Psyr_0141	0.24	-1.0
152,716	-		Psyr_0141	0.30	-0.1
152,730	+		Psyr_0141	0.31	-0.3
152,730	+		Psyr_0141	0.31	-3.7
152,730	+		Psyr_0141	0.31	+0.5
152,730	+		Psyr_0141	0.31	+4.8
152,730	+		Psyr_0141	0.31	+2.5
152,730	+		Psyr_0141	0.31	+1.7
152,730	+		Psyr_0141	0.31	-0.7
152,731	-		Psyr_0141	0.31	-1.7
152,911	-		Psyr_0141	0.49	-1.6
152,979	+		Psyr_0141	0.56	+0.9
152,979	+		Psyr_0141	0.56	+0.9
152,980	-		Psyr_0141	0.56	-1.8
152,980	-		Psyr_0141	0.56	-1.3
153,111	+		Psyr_0141	0.69	-3.1
153,111	+		Psyr_0141	0.69	-0.1
153,112	-		Psyr_0141	0.69	-2.4
153,112	-		Psyr_0141	0.69	+0.9
153,112	-		Psyr_0141	0.69	+4.3
153,112	-		Psyr_0141	0.69	-0.0
153,112	-		Psyr_0141	0.69	-2.7
153,112	-		Psyr_0141	0.69	-2.0
153,201	+		Psyr_0141	0.77	-0.7
153,201	+		Psyr_0141	0.77	-2.8
153,201	+		Psyr_0141	0.77	+4.6
153,202	-		Psyr_0141	0.78	-0.1
153,202	-		Psyr_0141	0.78	-2.7