Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0097 and Psyr_0098 overlap by 1 nucleotides Psyr_0098 and Psyr_0099 are separated by 8 nucleotides
Psyr_0097: Psyr_0097 - hypothetical protein, at 108,211 to 109,452
_0097
Psyr_0098: Psyr_0098 - Protein of unknown function DUF87, at 109,452 to 111,323
_0098
Psyr_0099: Psyr_0099 - Conserved hypothetical protein, at 111,332 to 111,541
_0099
Position (kb)
109
110
111
112 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3
4 at 108.483 kb on - strand, within Psyr_0097 at 108.504 kb on - strand, within Psyr_0097 at 108.515 kb on + strand, within Psyr_0097 at 108.516 kb on - strand, within Psyr_0097 at 108.548 kb on + strand, within Psyr_0097 at 108.549 kb on - strand, within Psyr_0097 at 108.614 kb on + strand, within Psyr_0097 at 108.813 kb on + strand, within Psyr_0097 at 108.814 kb on - strand, within Psyr_0097 at 108.818 kb on + strand, within Psyr_0097 at 108.885 kb on - strand, within Psyr_0097 at 108.964 kb on + strand, within Psyr_0097 at 108.964 kb on + strand, within Psyr_0097 at 109.014 kb on + strand, within Psyr_0097 at 109.090 kb on - strand, within Psyr_0097 at 109.141 kb on + strand, within Psyr_0097 at 109.404 kb on + strand at 109.493 kb on - strand at 109.568 kb on + strand at 109.568 kb on + strand at 109.568 kb on + strand at 109.569 kb on - strand at 109.607 kb on - strand at 109.642 kb on + strand, within Psyr_0098 at 109.756 kb on + strand, within Psyr_0098 at 109.757 kb on - strand, within Psyr_0098 at 109.793 kb on - strand, within Psyr_0098 at 109.821 kb on + strand, within Psyr_0098 at 109.904 kb on + strand, within Psyr_0098 at 109.952 kb on + strand, within Psyr_0098 at 110.005 kb on - strand, within Psyr_0098 at 110.021 kb on + strand, within Psyr_0098 at 110.035 kb on + strand, within Psyr_0098 at 110.036 kb on - strand, within Psyr_0098 at 110.036 kb on - strand, within Psyr_0098 at 110.036 kb on - strand, within Psyr_0098 at 110.161 kb on + strand, within Psyr_0098 at 110.213 kb on + strand, within Psyr_0098 at 110.316 kb on - strand, within Psyr_0098 at 110.474 kb on + strand, within Psyr_0098 at 110.475 kb on - strand, within Psyr_0098 at 110.508 kb on + strand, within Psyr_0098 at 110.573 kb on + strand, within Psyr_0098 at 110.573 kb on + strand, within Psyr_0098 at 110.574 kb on - strand, within Psyr_0098 at 110.574 kb on - strand, within Psyr_0098 at 110.574 kb on - strand, within Psyr_0098 at 110.585 kb on + strand, within Psyr_0098 at 110.587 kb on + strand, within Psyr_0098 at 110.715 kb on - strand, within Psyr_0098 at 110.715 kb on - strand, within Psyr_0098 at 110.752 kb on + strand, within Psyr_0098 at 110.752 kb on + strand, within Psyr_0098 at 110.752 kb on + strand, within Psyr_0098 at 110.752 kb on + strand, within Psyr_0098 at 110.752 kb on - strand, within Psyr_0098 at 110.754 kb on + strand, within Psyr_0098 at 110.834 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.836 kb on + strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.837 kb on - strand, within Psyr_0098 at 110.838 kb on + strand, within Psyr_0098 at 110.839 kb on - strand, within Psyr_0098 at 110.890 kb on + strand, within Psyr_0098 at 110.914 kb on + strand, within Psyr_0098 at 110.914 kb on + strand, within Psyr_0098 at 110.914 kb on + strand, within Psyr_0098 at 110.915 kb on - strand, within Psyr_0098 at 110.957 kb on + strand, within Psyr_0098 at 110.958 kb on - strand, within Psyr_0098 at 110.993 kb on + strand, within Psyr_0098 at 110.993 kb on + strand, within Psyr_0098 at 110.993 kb on + strand, within Psyr_0098 at 111.015 kb on - strand, within Psyr_0098 at 111.027 kb on - strand, within Psyr_0098 at 111.065 kb on + strand, within Psyr_0098 at 111.065 kb on + strand, within Psyr_0098 at 111.065 kb on + strand, within Psyr_0098 at 111.065 kb on + strand, within Psyr_0098 at 111.066 kb on - strand, within Psyr_0098 at 111.066 kb on - strand, within Psyr_0098 at 111.066 kb on - strand, within Psyr_0098 at 111.066 kb on - strand, within Psyr_0098 at 111.066 kb on - strand, within Psyr_0098 at 111.099 kb on - strand, within Psyr_0098 at 111.099 kb on - strand, within Psyr_0098 at 111.115 kb on + strand, within Psyr_0098 at 111.126 kb on - strand, within Psyr_0098 at 111.126 kb on - strand, within Psyr_0098 at 111.137 kb on + strand at 111.137 kb on + strand at 111.137 kb on + strand at 111.138 kb on - strand at 111.142 kb on + strand at 111.182 kb on + strand at 111.258 kb on - strand at 111.262 kb on - strand at 111.444 kb on + strand, within Psyr_0099 at 111.512 kb on - strand, within Psyr_0099 at 111.523 kb on + strand at 111.527 kb on + strand at 111.543 kb on + strand at 111.581 kb on + strand at 111.582 kb on - strand at 111.590 kb on - strand at 111.624 kb on - strand at 111.712 kb on - strand at 111.716 kb on + strand at 111.716 kb on + strand at 111.717 kb on - strand at 111.717 kb on - strand at 111.717 kb on - strand at 111.717 kb on - strand at 111.756 kb on - strand at 111.801 kb on + strand at 111.801 kb on + strand at 111.801 kb on + strand at 111.801 kb on + strand at 111.801 kb on + strand at 111.802 kb on - strand at 111.802 kb on - strand at 111.802 kb on - strand at 111.802 kb on - strand at 111.905 kb on - strand at 111.906 kb on + strand at 111.906 kb on + strand at 111.906 kb on + strand at 111.906 kb on + strand at 111.906 kb on + strand at 111.907 kb on - strand at 111.907 kb on - strand at 111.908 kb on + strand at 111.908 kb on + strand at 111.909 kb on - strand at 111.910 kb on + strand at 111.910 kb on + strand at 111.910 kb on + strand at 111.910 kb on + strand at 111.911 kb on - strand at 111.911 kb on - strand at 111.911 kb on - strand at 111.911 kb on - strand at 111.914 kb on + strand at 111.914 kb on + strand at 111.915 kb on - strand at 111.915 kb on - strand at 111.915 kb on - strand at 111.916 kb on + strand at 111.916 kb on + strand at 111.917 kb on - strand at 111.917 kb on - strand at 111.917 kb on - strand at 111.917 kb on - strand at 111.960 kb on - strand at 111.973 kb on + strand at 111.973 kb on + strand at 111.974 kb on - strand at 111.997 kb on - strand at 111.997 kb on - strand at 112.021 kb on - strand at 112.115 kb on + strand at 112.147 kb on - strand at 112.173 kb on + strand at 112.173 kb on + strand at 112.173 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 108,483 - Psyr_0097 0.22 -1.0 108,504 - Psyr_0097 0.24 -0.9 108,515 + Psyr_0097 0.24 -1.7 108,516 - Psyr_0097 0.25 -1.5 108,548 + Psyr_0097 0.27 -2.5 108,549 - Psyr_0097 0.27 +3.5 108,614 + Psyr_0097 0.32 -3.0 108,813 + Psyr_0097 0.48 -3.8 108,814 - Psyr_0097 0.49 -1.2 108,818 + Psyr_0097 0.49 -3.1 108,885 - Psyr_0097 0.54 -2.8 108,964 + Psyr_0097 0.61 -0.1 108,964 + Psyr_0097 0.61 -4.0 109,014 + Psyr_0097 0.65 +0.2 109,090 - Psyr_0097 0.71 -2.9 109,141 + Psyr_0097 0.75 +1.5 109,404 + -4.1 109,493 - -4.4 109,568 + +2.5 109,568 + -4.3 109,568 + -2.2 109,569 - +0.3 109,607 - +2.2 109,642 + Psyr_0098 0.10 -2.0 109,756 + Psyr_0098 0.16 -1.9 109,757 - Psyr_0098 0.16 -3.4 109,793 - Psyr_0098 0.18 -2.8 109,821 + Psyr_0098 0.20 -0.1 109,904 + Psyr_0098 0.24 +0.9 109,952 + Psyr_0098 0.27 -1.4 110,005 - Psyr_0098 0.30 -3.3 110,021 + Psyr_0098 0.30 +1.5 110,035 + Psyr_0098 0.31 -0.8 110,036 - Psyr_0098 0.31 -0.1 110,036 - Psyr_0098 0.31 +1.9 110,036 - Psyr_0098 0.31 -3.2 110,161 + Psyr_0098 0.38 -0.1 110,213 + Psyr_0098 0.41 -5.2 110,316 - Psyr_0098 0.46 -4.5 110,474 + Psyr_0098 0.55 +2.2 110,475 - Psyr_0098 0.55 -2.9 110,508 + Psyr_0098 0.56 -1.6 110,573 + Psyr_0098 0.60 +2.2 110,573 + Psyr_0098 0.60 -3.5 110,574 - Psyr_0098 0.60 -0.1 110,574 - Psyr_0098 0.60 +0.9 110,574 - Psyr_0098 0.60 -4.2 110,585 + Psyr_0098 0.61 +0.9 110,587 + Psyr_0098 0.61 +2.5 110,715 - Psyr_0098 0.67 -0.1 110,715 - Psyr_0098 0.67 -3.4 110,752 + Psyr_0098 0.69 -3.9 110,752 + Psyr_0098 0.69 -2.2 110,752 + Psyr_0098 0.69 +3.2 110,752 + Psyr_0098 0.69 -4.2 110,752 - Psyr_0098 0.69 -0.1 110,754 + Psyr_0098 0.70 -2.2 110,834 + Psyr_0098 0.74 -2.1 110,836 + Psyr_0098 0.74 -1.1 110,836 + Psyr_0098 0.74 -0.7 110,836 + Psyr_0098 0.74 -2.1 110,836 + Psyr_0098 0.74 -1.8 110,836 + Psyr_0098 0.74 +1.9 110,836 + Psyr_0098 0.74 -1.3 110,837 - Psyr_0098 0.74 -0.1 110,837 - Psyr_0098 0.74 -2.4 110,837 - Psyr_0098 0.74 -4.2 110,837 - Psyr_0098 0.74 -1.5 110,837 - Psyr_0098 0.74 +1.0 110,837 - Psyr_0098 0.74 -3.7 110,837 - Psyr_0098 0.74 -0.1 110,837 - Psyr_0098 0.74 -4.3 110,837 - Psyr_0098 0.74 -1.5 110,837 - Psyr_0098 0.74 -2.6 110,837 - Psyr_0098 0.74 -5.4 110,837 - Psyr_0098 0.74 -1.4 110,838 + Psyr_0098 0.74 -1.2 110,839 - Psyr_0098 0.74 +2.7 110,890 + Psyr_0098 0.77 -0.9 110,914 + Psyr_0098 0.78 -0.7 110,914 + Psyr_0098 0.78 -1.7 110,914 + Psyr_0098 0.78 +0.4 110,915 - Psyr_0098 0.78 -0.1 110,957 + Psyr_0098 0.80 +2.9 110,958 - Psyr_0098 0.80 +0.4 110,993 + Psyr_0098 0.82 +1.9 110,993 + Psyr_0098 0.82 -2.5 110,993 + Psyr_0098 0.82 -4.6 111,015 - Psyr_0098 0.83 -0.1 111,027 - Psyr_0098 0.84 -3.6 111,065 + Psyr_0098 0.86 +1.2 111,065 + Psyr_0098 0.86 -3.8 111,065 + Psyr_0098 0.86 +4.4 111,065 + Psyr_0098 0.86 -2.8 111,066 - Psyr_0098 0.86 -0.1 111,066 - Psyr_0098 0.86 -2.2 111,066 - Psyr_0098 0.86 -3.8 111,066 - Psyr_0098 0.86 -3.2 111,066 - Psyr_0098 0.86 +3.2 111,099 - Psyr_0098 0.88 -2.7 111,099 - Psyr_0098 0.88 -1.7 111,115 + Psyr_0098 0.89 -2.5 111,126 - Psyr_0098 0.89 -1.4 111,126 - Psyr_0098 0.89 -1.0 111,137 + -4.1 111,137 + +0.1 111,137 + +2.2 111,138 - -0.1 111,142 + -0.7 111,182 + +1.9 111,258 - -0.1 111,262 - -0.8 111,444 + Psyr_0099 0.53 -1.2 111,512 - Psyr_0099 0.86 -0.7 111,523 + -2.9 111,527 + -3.2 111,543 + -3.2 111,581 + -2.1 111,582 - -4.5 111,590 - -4.2 111,624 - -0.1 111,712 - +2.9 111,716 + -2.2 111,716 + -2.6 111,717 - -2.1 111,717 - +0.9 111,717 - -0.1 111,717 - -5.0 111,756 - -3.6 111,801 + -3.8 111,801 + +2.7 111,801 + -2.9 111,801 + +3.7 111,801 + -0.1 111,802 - -3.1 111,802 - -3.1 111,802 - +1.5 111,802 - +2.9 111,905 - -1.3 111,906 + -0.1 111,906 + +2.2 111,906 + -3.5 111,906 + -0.1 111,906 + -4.6 111,907 - -0.3 111,907 - -1.9 111,908 + -0.7 111,908 + -1.8 111,909 - -3.2 111,910 + -0.1 111,910 + -5.7 111,910 + +1.9 111,910 + -2.8 111,911 - -1.9 111,911 - -1.8 111,911 - -0.1 111,911 - -0.4 111,914 + -5.2 111,914 + -5.1 111,915 - -5.0 111,915 - -1.2 111,915 - -1.8 111,916 + -1.4 111,916 + -2.7 111,917 - -1.2 111,917 - -3.8 111,917 - -1.5 111,917 - +2.2 111,960 - -0.3 111,973 + +2.5 111,973 + +2.9 111,974 - +3.4 111,997 - -4.0 111,997 - -2.3 112,021 - +0.8 112,115 + -0.1 112,147 - -0.0 112,173 + -6.0 112,173 + -2.1 112,173 + -1.5
Or see this region's nucleotide sequence