Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0097

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
107,319	+		Psyr_0096	0.75	-2.4
107,319	+		Psyr_0096	0.75	-1.8
107,319	+		Psyr_0096	0.75	-0.9
107,319	+		Psyr_0096	0.75	-2.3
107,319	+		Psyr_0096	0.75	+0.9
107,319	+		Psyr_0096	0.75	-2.1
107,319	+		Psyr_0096	0.75	-1.3
107,319	+		Psyr_0096	0.75	-1.2
107,319	+		Psyr_0096	0.75	-3.5
107,319	+		Psyr_0096	0.75	-2.1
107,319	+		Psyr_0096	0.75	-0.1
107,319	+		Psyr_0096	0.75	-0.1
107,320	-		Psyr_0096	0.75	-0.4
107,320	-		Psyr_0096	0.75	-1.2
107,320	-		Psyr_0096	0.75	-1.2
107,320	-		Psyr_0096	0.75	-1.0
107,320	-		Psyr_0096	0.75	-1.0
107,320	-		Psyr_0096	0.75	-1.5
107,320	-		Psyr_0096	0.75	-3.7
107,320	-		Psyr_0096	0.75	+1.5
107,400	+		Psyr_0096	0.83	-2.1
107,434	-		Psyr_0096	0.87	-2.6
107,434	-		Psyr_0096	0.87	-3.5
107,434	-		Psyr_0096	0.87	-1.9
107,434	-		Psyr_0096	0.87	-1.2
107,529	+				+2.7
107,529	+				-0.7
107,604	+				-1.7
107,605	-				-1.1
107,669	-				+2.9
107,669	-				+2.7
107,717	+				-5.1
107,718	-				-1.0
107,718	-				-1.2
107,731	-				+1.5
107,731	-				+3.7
107,732	+				-2.9
107,732	+				-1.7
107,733	-				-3.0
107,733	-				-2.0
107,733	-				-0.1
107,736	+				-0.1
107,736	+				+2.2
107,736	+				-2.0
107,736	+				-0.2
107,736	+				-1.8
107,737	-				-2.4
107,737	-				+3.1
107,737	-				+0.5
107,740	+				+2.5
107,741	-				-1.2
107,741	-				-0.6
107,741	-				-0.6
107,741	-				+1.2
107,767	+				-3.8
107,839	+				-3.7
107,882	-				+3.1
107,885	+				-4.6
107,886	-				+3.5
107,886	-				+0.9
107,886	-				+2.9
107,899	+				+0.9
107,899	+				+2.5
107,899	+				-1.4
107,900	-				+1.9
107,902	+				+2.2
107,902	+				+0.4
107,902	+				-2.4
107,903	-				+1.5
107,903	-				-3.1
107,903	-				-0.1
107,942	+				-1.8
108,006	-				-2.8
108,059	+				-2.0
108,069	+				-2.9
108,070	-				-1.1
108,071	+				-0.8
108,071	+				-3.5
108,097	-				+0.9
108,112	+				+0.7
108,113	-				-4.2
108,114	+				+2.7
108,120	-				-1.1
108,130	+				-4.1
108,130	+				+1.9
108,131	-				-0.4
108,142	-				-3.8
108,209	+				-0.5
108,483	-		Psyr_0097	0.22	-1.0
108,504	-		Psyr_0097	0.24	-0.9
108,515	+		Psyr_0097	0.24	-1.7
108,516	-		Psyr_0097	0.25	-1.5
108,548	+		Psyr_0097	0.27	-2.5
108,549	-		Psyr_0097	0.27	+3.5
108,614	+		Psyr_0097	0.32	-3.0
108,813	+		Psyr_0097	0.48	-3.8
108,814	-		Psyr_0097	0.49	-1.2
108,818	+		Psyr_0097	0.49	-3.1
108,885	-		Psyr_0097	0.54	-2.8
108,964	+		Psyr_0097	0.61	-0.1
108,964	+		Psyr_0097	0.61	-4.0
109,014	+		Psyr_0097	0.65	+0.2
109,090	-		Psyr_0097	0.71	-2.9
109,141	+		Psyr_0097	0.75	+1.5
109,404	+				-4.1
109,493	-				-4.4
109,568	+				+2.5
109,568	+				-4.3
109,568	+				-2.2
109,569	-				+0.3
109,607	-				+2.2
109,642	+		Psyr_0098	0.10	-2.0
109,756	+		Psyr_0098	0.16	-1.9
109,757	-		Psyr_0098	0.16	-3.4
109,793	-		Psyr_0098	0.18	-2.8
109,821	+		Psyr_0098	0.20	-0.1
109,904	+		Psyr_0098	0.24	+0.9
109,952	+		Psyr_0098	0.27	-1.4
110,005	-		Psyr_0098	0.30	-3.3
110,021	+		Psyr_0098	0.30	+1.5
110,035	+		Psyr_0098	0.31	-0.8
110,036	-		Psyr_0098	0.31	-0.1
110,036	-		Psyr_0098	0.31	+1.9
110,036	-		Psyr_0098	0.31	-3.2
110,161	+		Psyr_0098	0.38	-0.1
110,213	+		Psyr_0098	0.41	-5.2
110,316	-		Psyr_0098	0.46	-4.5