Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0003

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,676	+				-2.4
2,698	+				-0.5
2,698	+				+4.2
2,698	+				-2.1
2,698	+				+3.4
2,698	+				-0.4
2,698	+				+0.0
2,698	+				-0.8
2,698	+				-1.4
2,698	+				-0.9
2,698	+				-2.3
2,698	+				-0.1
2,698	+				+3.1
2,698	+				+3.1
2,698	+				-0.2
2,698	+				-0.2
2,698	+				-1.8
2,699	-				-1.8
2,699	-				-1.9
2,699	-				-2.6
2,699	-				-0.8
2,699	-				-3.8
2,699	-				-1.5
2,699	-				-2.0
2,699	-				-4.3
2,699	-				-0.1
2,699	-				-1.8
2,699	-				-2.1
2,699	-				-4.0
2,699	-				-5.6
2,710	-				-0.1
2,827	-		Psyr_0003	0.11	-1.5
2,887	+		Psyr_0003	0.17	-1.6
3,095	+		Psyr_0003	0.36	-2.4
3,095	+		Psyr_0003	0.36	-0.1
3,207	+		Psyr_0003	0.46	+1.5
3,207	+		Psyr_0003	0.46	-2.8
3,289	+		Psyr_0003	0.53	-1.5
3,289	+		Psyr_0003	0.53	-1.6
3,289	+		Psyr_0003	0.53	-0.1
3,289	+		Psyr_0003	0.53	-2.2
3,289	+		Psyr_0003	0.53	+2.5
3,291	+		Psyr_0003	0.53	-0.0
3,291	+		Psyr_0003	0.53	-4.7
3,291	+		Psyr_0003	0.53	-1.4
3,291	+		Psyr_0003	0.53	-1.9
3,291	+		Psyr_0003	0.53	-3.2
3,291	+		Psyr_0003	0.53	-1.2
3,364	+		Psyr_0003	0.60	-0.1
3,364	+		Psyr_0003	0.60	-1.9
3,364	+		Psyr_0003	0.60	-0.1
3,364	+		Psyr_0003	0.60	-2.4
3,367	+		Psyr_0003	0.60	-1.6
3,395	+		Psyr_0003	0.63	-3.6
3,395	+		Psyr_0003	0.63	+3.9
3,395	+		Psyr_0003	0.63	-1.0
3,395	+		Psyr_0003	0.63	+1.9
3,395	+		Psyr_0003	0.63	-3.9
3,395	+		Psyr_0003	0.63	-2.7
3,395	+		Psyr_0003	0.63	-3.1
3,395	+		Psyr_0003	0.63	-1.5
3,395	+		Psyr_0003	0.63	+1.9
3,395	+		Psyr_0003	0.63	-0.7
3,395	+		Psyr_0003	0.63	-0.8
3,395	+		Psyr_0003	0.63	-0.1
3,395	+		Psyr_0003	0.63	+2.5
3,395	+		Psyr_0003	0.63	+0.8
3,395	+		Psyr_0003	0.63	-5.4
3,395	+		Psyr_0003	0.63	-0.8
3,395	+		Psyr_0003	0.63	+0.5
3,399	+		Psyr_0003	0.63	-2.6
3,399	+		Psyr_0003	0.63	-0.3
3,399	+		Psyr_0003	0.63	+2.5
3,399	+		Psyr_0003	0.63	+1.5
3,399	+		Psyr_0003	0.63	+0.3
3,480	+		Psyr_0003	0.71	-0.4
3,480	+		Psyr_0003	0.71	-1.2
3,507	+		Psyr_0003	0.73	+0.2
3,507	+		Psyr_0003	0.73	+0.5
3,552	+		Psyr_0003	0.77	-4.9
3,597	+		Psyr_0003	0.81	-1.7
3,597	+		Psyr_0003	0.81	-1.0
3,597	+		Psyr_0003	0.81	-3.0
3,597	+		Psyr_0003	0.81	-2.1
3,601	+		Psyr_0003	0.82	-0.9
3,601	+		Psyr_0003	0.82	-0.9
3,601	+		Psyr_0003	0.82	+0.0
3,601	+		Psyr_0003	0.82	+1.4
3,601	+		Psyr_0003	0.82	-1.8
3,608	+		Psyr_0003	0.82	+3.5
3,608	+		Psyr_0003	0.82	-1.7
3,608	+		Psyr_0003	0.82	-1.3
3,674	+		Psyr_0003	0.88	-3.3
3,690	+		Psyr_0003	0.90	-2.8
3,701	+				-4.2
3,701	+				+0.4