Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0001

Experiment: KB with Mitomycin C 0.625 ug/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsyr_0001 and Psyr_0002 are separated by 38 nucleotides Psyr_0001: Psyr_0001 - chromosomal replication initiator protein DnaA, at 1 to 1,536 _0001 Psyr_0002: Psyr_0002 - DNA polymerase III, beta subunit, at 1,575 to 2,678 _0002 Position (kb) 0 1 2Strain fitness (log2 ratio) -2 -1 0 1at 1.537 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml
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1,537 + -2.2

Or see this region's nucleotide sequence