Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03204

Experiment: PYE with copper (II) chloride 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with copper (II) chloride 0.25 mM
3,363,978	+		CCNA_03203	0.12	+0.8
3,363,984	+		CCNA_03203	0.12	-1.4
3,363,984	+		CCNA_03203	0.12	+0.3
3,363,984	+		CCNA_03203	0.12	+2.0
3,363,985	+		CCNA_03203	0.13	+0.3
3,363,992	+		CCNA_03203	0.13	-0.2
3,363,992	+		CCNA_03203	0.13	-1.1
3,363,992	-		CCNA_03203	0.13	+0.1
3,363,993	-		CCNA_03203	0.13	-1.1
3,363,993	-		CCNA_03203	0.13	+0.0
3,363,993	-		CCNA_03203	0.13	+0.9
3,364,017	-		CCNA_03203	0.16	-0.3
3,364,035	-		CCNA_03203	0.18	-1.0
3,364,035	-		CCNA_03203	0.18	-1.0
3,364,111	-		CCNA_03203	0.25	+0.7
3,364,119	+		CCNA_03203	0.26	+0.6
3,364,199	+		CCNA_03203	0.34	+0.8
3,364,199	+		CCNA_03203	0.34	-0.4
3,364,207	-		CCNA_03203	0.35	-1.5
3,364,234	+		CCNA_03203	0.38	+4.0
3,364,234	+		CCNA_03203	0.38	-0.3
3,364,240	-		CCNA_03203	0.39	+0.7
3,364,242	-		CCNA_03203	0.39	-1.8
3,364,263	+		CCNA_03203	0.41	-0.5
3,364,273	+		CCNA_03203	0.42	+0.3
3,364,281	-		CCNA_03203	0.43	+0.9
3,364,304	-		CCNA_03203	0.45	-1.1
3,364,329	+		CCNA_03203	0.48	-0.5
3,364,339	+		CCNA_03203	0.49	+0.5
3,364,347	-		CCNA_03203	0.50	+0.3
3,364,378	+		CCNA_03203	0.53	-1.0
3,364,386	-		CCNA_03203	0.54	+0.3
3,364,386	-		CCNA_03203	0.54	-0.8
3,364,386	-		CCNA_03203	0.54	-1.7
3,364,386	-		CCNA_03203	0.54	+1.3
3,364,427	-		CCNA_03203	0.58	-0.1
3,364,467	+		CCNA_03203	0.62	+0.8
3,364,467	+		CCNA_03203	0.62	+1.1
3,364,467	+		CCNA_03203	0.62	+0.1
3,364,475	-		CCNA_03203	0.63	-1.2
3,364,475	-		CCNA_03203	0.63	+0.6
3,364,475	-		CCNA_03203	0.63	-0.6
3,364,517	+		CCNA_03203	0.67	-1.1
3,364,527	+		CCNA_03203	0.68	-0.6
3,364,576	+		CCNA_03203	0.73	+0.4
3,364,591	+		CCNA_03203	0.75	+0.7
3,364,591	+		CCNA_03203	0.75	-0.9
3,364,591	+		CCNA_03203	0.75	-0.5
3,364,620	+		CCNA_03203	0.78	+0.7
3,364,620	+		CCNA_03203	0.78	+0.0
3,364,646	+		CCNA_03203	0.80	-0.6
3,364,664	-		CCNA_03203	0.82	-0.9
3,364,818	+				+0.9
3,364,818	+				-0.7
3,364,818	+				+1.6
3,364,818	+				-0.8
3,364,818	+				-0.2
3,364,818	+				+0.1
3,364,818	+				+1.0
3,364,818	+				+1.6
3,364,818	+				+0.3
3,364,818	+				+1.2
3,364,818	+				+0.5
3,364,818	+				-0.9
3,364,818	+				+0.2
3,364,818	+				-1.0
3,364,818	+				+0.7
3,364,826	-				-1.2
3,364,826	-				-0.9
3,364,826	-				+0.4
3,364,826	-				-0.1
3,364,826	-				-0.0
3,364,826	-				+0.7
3,364,826	-				+0.2
3,364,826	-				-1.8
3,364,826	-				+0.1
3,364,826	-				-0.9
3,364,826	-				-1.6
3,364,826	-				-2.1
3,364,826	-				+0.3
3,364,826	-				-1.9
3,364,826	-				-2.6
3,364,826	-				-1.3
3,364,827	-				+0.9
3,364,842	+				+0.4
3,364,880	+				+0.4
3,364,887	+				+0.5
3,364,942	+				+0.1
3,364,984	+				+0.0
3,365,000	+				-0.2
3,365,000	+				+2.0
3,365,003	+				+0.1
3,365,013	+				+0.6
3,365,021	-				+0.2
3,365,021	-				+0.8
3,365,028	+				-0.3
3,365,080	+				+0.1
3,365,082	+				+1.5
3,365,123	-		CCNA_03204	0.12	+0.6
3,365,130	-		CCNA_03204	0.13	-2.9
3,365,132	+		CCNA_03204	0.13	+0.9
3,365,139	+		CCNA_03204	0.14	+0.3
3,365,173	+		CCNA_03204	0.17	-1.3
3,365,181	-		CCNA_03204	0.17	-0.3
3,365,181	-		CCNA_03204	0.17	-0.3
3,365,200	+		CCNA_03204	0.19	+2.1
3,365,208	-		CCNA_03204	0.20	+0.0
3,365,208	-		CCNA_03204	0.20	-2.2
3,365,256	+		CCNA_03204	0.23	+0.4
3,365,264	-		CCNA_03204	0.24	-0.1
3,365,264	-		CCNA_03204	0.24	+1.2
3,365,286	+		CCNA_03204	0.26	+2.8
3,365,286	+		CCNA_03204	0.26	-0.1
3,365,286	+		CCNA_03204	0.26	+0.6
3,365,294	-		CCNA_03204	0.27	-1.5
3,365,369	+		CCNA_03204	0.33	+1.3
3,365,377	-		CCNA_03204	0.33	-1.4
3,365,382	-				+1.6
3,365,392	+		CCNA_03204	0.35	-0.0
3,365,456	+		CCNA_03204	0.40	+1.5
3,365,473	+		CCNA_03204	0.41	-0.2
3,365,501	+		CCNA_03204	0.44	+2.2
3,365,519	-		CCNA_03204	0.45	+0.1
3,365,528	+		CCNA_03204	0.46	+0.1
3,365,528	+		CCNA_03204	0.46	+3.2
3,365,528	+		CCNA_03204	0.46	+1.1
3,365,528	+		CCNA_03204	0.46	-1.2
3,365,528	+		CCNA_03204	0.46	-0.7
3,365,528	+		CCNA_03204	0.46	+1.7
3,365,528	+		CCNA_03204	0.46	+1.1
3,365,528	+		CCNA_03204	0.46	+0.2
3,365,536	-		CCNA_03204	0.47	+1.2
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,536	-		CCNA_03204	0.47	-0.1
3,365,536	-		CCNA_03204	0.47	-0.1
3,365,536	-		CCNA_03204	0.47	+0.9
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,536	-		CCNA_03204	0.47	+0.5
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,536	-		CCNA_03204	0.47	-1.1
3,365,536	-		CCNA_03204	0.47	+0.4
3,365,536	-		CCNA_03204	0.47	+0.7
3,365,536	-		CCNA_03204	0.47	+0.5
3,365,536	-		CCNA_03204	0.47	+2.4
3,365,536	-		CCNA_03204	0.47	+0.0
3,365,536	-		CCNA_03204	0.47	+1.4
3,365,538	+		CCNA_03204	0.47	+2.4
3,365,564	+		CCNA_03204	0.49	-0.5
3,365,571	+		CCNA_03204	0.50	-0.7
3,365,600	+		CCNA_03204	0.52	-0.6
3,365,600	+		CCNA_03204	0.52	+0.5
3,365,613	-		CCNA_03204	0.53	-1.2
3,365,651	+		CCNA_03204	0.56	-1.4
3,365,664	-		CCNA_03204	0.57	+0.0
3,365,669	-		CCNA_03204	0.58	+0.9
3,365,669	-		CCNA_03204	0.58	+1.4
3,365,670	+		CCNA_03204	0.58	-1.2
3,365,678	-		CCNA_03204	0.58	+0.7
3,365,683	-		CCNA_03204	0.59	+0.3
3,365,683	-		CCNA_03204	0.59	+0.7
3,365,714	-		CCNA_03204	0.61	+0.6
3,365,714	-		CCNA_03204	0.61	+0.0
3,365,739	+		CCNA_03204	0.63	+0.2
3,365,748	+		CCNA_03204	0.64	+0.0
3,365,748	+		CCNA_03204	0.64	-0.9
3,365,748	+		CCNA_03204	0.64	+0.6
3,365,748	+		CCNA_03204	0.64	-0.8
3,365,751	-		CCNA_03204	0.64	-1.8
3,365,756	-		CCNA_03204	0.65	-1.0
3,365,756	-		CCNA_03204	0.65	-0.3
3,365,785	+		CCNA_03204	0.67	-0.3
3,365,790	+		CCNA_03204	0.68	+0.2
3,365,790	+		CCNA_03204	0.68	-1.0
3,365,790	+		CCNA_03204	0.68	+1.5
3,365,798	-		CCNA_03204	0.68	-0.6
3,365,809	+		CCNA_03204	0.69	+0.3
3,365,840	-		CCNA_03204	0.72	-1.5
3,365,840	-		CCNA_03204	0.72	-0.1
3,365,912	-		CCNA_03204	0.78	-0.2
3,365,944	-		CCNA_03204	0.80	+0.3
3,365,944	-		CCNA_03204	0.80	-0.7
3,365,945	-		CCNA_03204	0.80	+0.4
3,365,949	-		CCNA_03204	0.81	-0.7
3,365,985	-		CCNA_03204	0.84	-2.3
3,365,985	-		CCNA_03204	0.84	-0.5
3,365,996	-		CCNA_03204	0.85	-0.1
3,365,996	-		CCNA_03204	0.85	+0.2
3,366,016	+		CCNA_03204	0.86	+1.8
3,366,088	+				-1.3
3,366,097	+				+0.7
3,366,110	-				+0.3
3,366,137	+				+0.4
3,366,137	+				+0.2
3,366,145	-				-0.2
3,366,145	-				+1.0
3,366,154	+				+0.1
3,366,161	+				-0.1
3,366,161	+				+0.2
3,366,161	+				+0.9
3,366,162	-				-0.5
3,366,169	+				+0.7
3,366,169	-				-0.1
3,366,169	-				+0.2
3,366,179	-				-1.7
3,366,346	-				+2.4
3,366,356	+				-0.5
3,366,356	+				+1.1
3,366,356	+				-1.1
3,366,364	-				+0.6
3,366,364	-				+2.3
3,366,435	-				-1.1
3,366,459	+				+2.8
3,366,461	+				+2.0
3,366,485	+				+2.8
3,366,493	-				-0.1
3,366,504	+				+2.9
3,366,504	+				+1.5
3,366,504	+				+1.9
3,366,504	+				+2.1
3,366,504	+				+2.9
3,366,512	-				+2.4
3,366,512	-				+0.4
3,366,512	-				+1.3
3,366,561	+				+2.1
3,366,581	+		CCNA_03205	0.11	+2.6
3,366,589	-		CCNA_03205	0.11	+0.8
3,366,589	-		CCNA_03205	0.11	-2.1
3,366,591	+		CCNA_03205	0.11	+2.3
3,366,591	+		CCNA_03205	0.11	+1.5
3,366,591	+		CCNA_03205	0.11	+2.2
3,366,594	-		CCNA_03205	0.11	-0.9
3,366,599	-		CCNA_03205	0.12	-1.2
3,366,599	-		CCNA_03205	0.12	-0.3
3,366,599	-		CCNA_03205	0.12	-0.3
3,366,642	+		CCNA_03205	0.14	+2.4
3,366,650	+		CCNA_03205	0.15	+4.9
3,366,702	+		CCNA_03205	0.18	+2.0
3,366,702	+		CCNA_03205	0.18	+1.1
3,366,702	+		CCNA_03205	0.18	+1.6
3,366,710	-		CCNA_03205	0.18	+1.3
3,366,722	+		CCNA_03205	0.19	+1.7
3,366,722	+		CCNA_03205	0.19	+2.2
3,366,723	+		CCNA_03205	0.19	+1.4
3,366,730	-		CCNA_03205	0.20	+2.3
3,366,730	-		CCNA_03205	0.20	+1.1
3,366,739	+		CCNA_03205	0.20	+1.0
3,366,763	+		CCNA_03205	0.22	+2.5
3,366,763	+		CCNA_03205	0.22	+1.8
3,366,763	+		CCNA_03205	0.22	+2.0
3,366,771	-		CCNA_03205	0.22	-0.1
3,366,771	-		CCNA_03205	0.22	-1.1
3,366,771	-		CCNA_03205	0.22	-1.7
3,366,771	-		CCNA_03205	0.22	-1.5
3,366,843	+		CCNA_03205	0.26	+2.5
3,366,855	+		CCNA_03205	0.27	+2.2
3,366,862	-		CCNA_03205	0.28	+0.3
3,366,878	-		CCNA_03205	0.29	+2.4
3,366,884	-		CCNA_03205	0.29	+0.0
3,366,925	+		CCNA_03205	0.31	+2.2
3,366,945	+		CCNA_03205	0.33	+1.1
3,366,945	+		CCNA_03205	0.33	+2.3
3,366,953	+		CCNA_03205	0.33	+2.1
3,366,970	+		CCNA_03205	0.34	+2.9
3,366,978	-		CCNA_03205	0.35	+1.3
3,366,996	+		CCNA_03205	0.36	+1.7
3,367,020	-		CCNA_03205	0.37	-1.1
3,367,031	-		CCNA_03205	0.38	-0.2
3,367,076	-		CCNA_03205	0.41	+2.1
3,367,094	-		CCNA_03205	0.42	-0.3
3,367,104	+		CCNA_03205	0.42	+1.3
3,367,129	+		CCNA_03205	0.44	+2.9
3,367,136	+		CCNA_03205	0.44	+2.4
3,367,157	+		CCNA_03205	0.45	+3.3
3,367,167	+		CCNA_03205	0.46	+1.2
3,367,167	+		CCNA_03205	0.46	+2.1
3,367,175	-		CCNA_03205	0.47	+0.8
3,367,175	-		CCNA_03205	0.47	-0.6