Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02352

Experiment: PYE with copper (II) chloride 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with copper (II) chloride 0.25 mM
2,489,622	+		CCNA_02350	0.64	+1.1
2,489,630	-		CCNA_02350	0.66	+0.3
2,489,645	+		CCNA_02350	0.70	-0.1
2,489,653	-		CCNA_02350	0.72	+4.5
2,489,663	+		CCNA_02350	0.74	-0.3
2,489,720	-		CCNA_02350	0.89	+0.4
2,489,723	+		CCNA_02350	0.89	+1.0
2,489,731	-				+0.1
2,489,738	-				-0.9
2,489,783	-				-2.1
2,489,823	+				+2.7
2,489,827	-				-1.7
2,489,831	-				+1.1
2,489,861	+				-0.9
2,489,894	-				+1.0
2,490,037	+		CCNA_02351	0.16	+0.1
2,490,056	-		CCNA_02351	0.19	+1.2
2,490,111	-		CCNA_02351	0.28	+1.4
2,490,175	-		CCNA_02351	0.38	+0.5
2,490,203	+		CCNA_02351	0.42	-0.7
2,490,214	+		CCNA_02351	0.44	-1.9
2,490,232	-		CCNA_02351	0.47	-0.4
2,490,232	-		CCNA_02351	0.47	+2.1
2,490,250	+		CCNA_02351	0.50	-0.7
2,490,293	-		CCNA_02351	0.57	+2.0
2,490,317	+		CCNA_02351	0.60	-0.1
2,490,325	-		CCNA_02351	0.62	+1.1
2,490,325	-		CCNA_02351	0.62	+0.0
2,490,325	-		CCNA_02351	0.62	+0.6
2,490,325	-		CCNA_02351	0.62	+1.2
2,490,325	-		CCNA_02351	0.62	-0.3
2,490,325	-		CCNA_02351	0.62	+0.5
2,490,325	-		CCNA_02351	0.62	-0.0
2,490,325	-		CCNA_02351	0.62	+0.5
2,490,334	+		CCNA_02351	0.63	+0.7
2,490,375	+		CCNA_02351	0.70	+1.5
2,490,383	-		CCNA_02351	0.71	-1.7
2,490,396	+		CCNA_02351	0.73	+2.1
2,490,396	+		CCNA_02351	0.73	-1.0
2,490,436	+		CCNA_02351	0.79	+0.3
2,490,441	+		CCNA_02351	0.80	+1.4
2,490,496	-		CCNA_02351	0.89	+2.6
2,490,519	+				-2.0
2,490,525	+				+0.3
2,490,528	-				+0.7
2,490,528	-				+1.8
2,490,571	+				+0.7
2,490,576	+				+0.3
2,490,600	+				-1.7
2,490,606	-				+1.7
2,490,633	-				+1.6
2,490,645	+				+0.2
2,490,653	-				+1.9
2,490,678	+				-1.0
2,490,686	-				+2.7
2,490,686	-				+2.1
2,490,686	-				+1.8
2,490,691	-				+2.2
2,490,691	-				+1.3
2,490,718	+				+0.2
2,490,732	-				+2.2
2,490,748	+				+0.9
2,490,823	-				+1.3
2,490,839	+		CCNA_02352	0.10	-1.4
2,490,906	-		CCNA_02352	0.13	+0.8
2,490,944	+		CCNA_02352	0.15	+0.3
2,490,945	+		CCNA_02352	0.15	+2.5
2,490,945	+		CCNA_02352	0.15	-2.0
2,490,945	+		CCNA_02352	0.15	-0.9
2,490,952	-		CCNA_02352	0.15	+0.4
2,490,953	-		CCNA_02352	0.15	+2.1
2,490,953	-		CCNA_02352	0.15	-0.8
2,490,953	-		CCNA_02352	0.15	+0.8
2,490,972	-		CCNA_02352	0.16	+0.5
2,490,974	+		CCNA_02352	0.16	-1.6
2,490,976	+		CCNA_02352	0.17	+0.4
2,490,982	-		CCNA_02352	0.17	+3.5
2,491,010	+		CCNA_02352	0.18	-1.1
2,491,010	+		CCNA_02352	0.18	-0.6
2,491,018	-		CCNA_02352	0.18	+0.5
2,491,018	-		CCNA_02352	0.18	+5.2
2,491,018	-		CCNA_02352	0.18	+1.1
2,491,019	+		CCNA_02352	0.18	-1.2
2,491,020	+		CCNA_02352	0.19	+1.3
2,491,037	+		CCNA_02352	0.19	+1.0
2,491,037	+		CCNA_02352	0.19	+0.6
2,491,042	+		CCNA_02352	0.20	-0.4
2,491,044	+		CCNA_02352	0.20	+0.4
2,491,045	-		CCNA_02352	0.20	+1.3
2,491,045	-		CCNA_02352	0.20	+1.4
2,491,052	-		CCNA_02352	0.20	+1.1
2,491,072	+		CCNA_02352	0.21	-1.4
2,491,102	+		CCNA_02352	0.22	-0.4
2,491,102	+		CCNA_02352	0.22	-1.1
2,491,102	-		CCNA_02352	0.22	+1.6
2,491,109	+		CCNA_02352	0.23	+1.3
2,491,110	-		CCNA_02352	0.23	+2.2
2,491,127	-		CCNA_02352	0.23	+1.5
2,491,134	+		CCNA_02352	0.24	-1.1
2,491,136	-		CCNA_02352	0.24	+0.9
2,491,142	-		CCNA_02352	0.24	+2.3
2,491,174	-		CCNA_02352	0.26	+1.2
2,491,174	-		CCNA_02352	0.26	+0.9
2,491,174	-		CCNA_02352	0.26	+1.6
2,491,240	-		CCNA_02352	0.29	+1.8
2,491,245	-		CCNA_02352	0.29	+1.7
2,491,300	-		CCNA_02352	0.31	+1.1
2,491,374	+		CCNA_02352	0.35	-0.9
2,491,384	-		CCNA_02352	0.35	+0.9
2,491,415	+		CCNA_02352	0.37	+0.4
2,491,442	-		CCNA_02352	0.38	+1.9
2,491,509	-		CCNA_02352	0.41	+1.1
2,491,520	-		CCNA_02352	0.42	+1.1
2,491,533	+		CCNA_02352	0.42	-0.5
2,491,533	+		CCNA_02352	0.42	+1.5
2,491,533	+		CCNA_02352	0.42	-0.4
2,491,541	-		CCNA_02352	0.42	+1.0
2,491,541	-		CCNA_02352	0.42	+0.9
2,491,577	-		CCNA_02352	0.44	+1.2
2,491,613	+		CCNA_02352	0.46	+1.0
2,491,621	-		CCNA_02352	0.46	+0.8
2,491,664	-		CCNA_02352	0.48	+0.3
2,491,674	-		CCNA_02352	0.49	+0.5
2,491,679	-		CCNA_02352	0.49	+1.2
2,491,684	-		CCNA_02352	0.49	+1.6
2,491,711	-		CCNA_02352	0.50	+1.1
2,491,711	-		CCNA_02352	0.50	+4.4
2,491,711	-		CCNA_02352	0.50	+1.2
2,491,719	+		CCNA_02352	0.51	+2.7
2,491,719	+		CCNA_02352	0.51	+1.9
2,491,719	+		CCNA_02352	0.51	+2.8
2,491,727	-		CCNA_02352	0.51	+0.3
2,491,727	-		CCNA_02352	0.51	-1.5
2,491,727	-		CCNA_02352	0.51	+0.0
2,491,734	+		CCNA_02352	0.51	+0.3
2,491,734	+		CCNA_02352	0.51	-2.1
2,491,748	+		CCNA_02352	0.52	+1.4
2,491,778	+		CCNA_02352	0.53	+0.3
2,491,778	+		CCNA_02352	0.53	+0.7
2,491,786	-		CCNA_02352	0.54	+1.9
2,491,786	-		CCNA_02352	0.54	+0.9
2,491,809	+		CCNA_02352	0.55	+0.4
2,491,811	+		CCNA_02352	0.55	+2.3
2,491,811	+		CCNA_02352	0.55	-1.1
2,491,811	+				+1.6
2,491,811	+		CCNA_02352	0.55	-0.4
2,491,819	-		CCNA_02352	0.55	+1.6
2,491,819	-		CCNA_02352	0.55	-0.4
2,491,819	-		CCNA_02352	0.55	+0.7
2,491,838	+		CCNA_02352	0.56	+0.3
2,491,868	+		CCNA_02352	0.58	-2.6
2,491,881	-		CCNA_02352	0.58	+0.4
2,491,924	+		CCNA_02352	0.60	-1.1
2,492,008	-		CCNA_02352	0.64	+0.6
2,492,064	+		CCNA_02352	0.67	-0.2
2,492,064	+		CCNA_02352	0.67	+0.9
2,492,064	+		CCNA_02352	0.67	+0.3
2,492,064	+		CCNA_02352	0.67	-1.0
2,492,064	+		CCNA_02352	0.67	+1.6
2,492,064	+		CCNA_02352	0.67	+0.0
2,492,064	+		CCNA_02352	0.67	+0.5
2,492,072	-		CCNA_02352	0.67	+1.5
2,492,072	-		CCNA_02352	0.67	+1.4
2,492,072	-		CCNA_02352	0.67	+1.4
2,492,072	-		CCNA_02352	0.67	+1.8
2,492,072	-		CCNA_02352	0.67	+1.1
2,492,078	-		CCNA_02352	0.67	+2.9
2,492,082	-		CCNA_02352	0.67	+1.7
2,492,094	+		CCNA_02352	0.68	-1.5
2,492,103	+		CCNA_02352	0.68	+0.2
2,492,108	+		CCNA_02352	0.69	-1.6
2,492,150	-		CCNA_02352	0.70	+1.8
2,492,163	-		CCNA_02352	0.71	+0.7
2,492,206	-		CCNA_02352	0.73	+0.1
2,492,206	-		CCNA_02352	0.73	+1.2
2,492,215	-		CCNA_02352	0.73	+1.2
2,492,235	+		CCNA_02352	0.74	+0.5
2,492,235	+		CCNA_02352	0.74	-0.6
2,492,235	+		CCNA_02352	0.74	+2.0
2,492,243	-		CCNA_02352	0.75	+1.8
2,492,243	-		CCNA_02352	0.75	+0.4
2,492,243	-		CCNA_02352	0.75	+0.9
2,492,292	+		CCNA_02352	0.77	-2.8
2,492,300	-		CCNA_02352	0.77	+0.1
2,492,358	+		CCNA_02352	0.80	+0.9
2,492,358	+		CCNA_02352	0.80	-0.6
2,492,361	-		CCNA_02352	0.80	+1.3
2,492,366	-		CCNA_02352	0.80	+0.5
2,492,366	-		CCNA_02352	0.80	+0.1
2,492,367	-		CCNA_02352	0.80	+0.8
2,492,389	-		CCNA_02352	0.81	+0.8
2,492,403	+		CCNA_02352	0.82	-0.8
2,492,413	-		CCNA_02352	0.83	+1.6
2,492,413	-		CCNA_02352	0.83	+0.2
2,492,423	-		CCNA_02352	0.83	+1.2
2,492,438	+		CCNA_02352	0.84	-1.2
2,492,446	-		CCNA_02352	0.84	+1.0
2,492,460	-		CCNA_02352	0.85	+0.2
2,492,485	+		CCNA_02352	0.86	-1.7
2,492,491	-		CCNA_02352	0.86	+0.9
2,492,533	+		CCNA_02352	0.88	-2.3
2,492,578	+				-1.3
2,492,583	+				+0.6
2,492,591	-				+2.8
2,492,591	-				+1.6
2,492,612	-				+0.7
2,492,653	+				+1.0
2,492,658	-				-1.4
2,492,664	+				-0.3
2,492,666	-				+2.9
2,492,668	+				+2.5
2,492,672	-				+0.9
2,492,681	+				-0.2
2,492,688	+				+0.0
2,492,709	-				+0.2
2,492,714	-				-0.2
2,492,756	+				-1.5
2,492,778	+				-0.5
2,492,784	-				+0.4
2,492,800	-				+1.8
2,492,803	+				-0.7
2,492,806	-				+2.5
2,492,818	+				+1.0
2,492,821	-				+1.8
2,492,842	+		CCNA_02353	0.10	-0.8
2,492,842	+		CCNA_02353	0.10	-0.9
2,492,842	+		CCNA_02353	0.10	-0.7
2,492,842	+		CCNA_02353	0.10	+0.2
2,492,850	-		CCNA_02353	0.12	+1.4
2,492,850	-		CCNA_02353	0.12	+1.6
2,492,855	-		CCNA_02353	0.13	+0.7
2,492,904	+		CCNA_02353	0.24	+0.8
2,492,904	+		CCNA_02353	0.24	-1.5
2,492,959	-		CCNA_02353	0.35	+0.7
2,492,959	-		CCNA_02353	0.35	+1.9
2,492,965	+		CCNA_02353	0.37	-1.1
2,492,965	+		CCNA_02353	0.37	-1.0
2,492,965	+		CCNA_02353	0.37	-2.1
2,492,973	-		CCNA_02353	0.38	+1.2
2,492,973	-		CCNA_02353	0.38	+0.7
2,492,973	-		CCNA_02353	0.38	-0.1
2,492,996	+		CCNA_02353	0.43	+0.6
2,492,997	+		CCNA_02353	0.44	-0.1
2,493,003	+		CCNA_02353	0.45	-1.8
2,493,004	-		CCNA_02353	0.45	-0.1
2,493,036	+		CCNA_02353	0.52	-1.5
2,493,040	-		CCNA_02353	0.53	+1.0
2,493,070	+		CCNA_02353	0.59	+0.3
2,493,099	-		CCNA_02353	0.66	+1.6
2,493,111	-		CCNA_02353	0.68	+3.4
2,493,111	-		CCNA_02353	0.68	+1.0
2,493,116	+		CCNA_02353	0.69	+0.8
2,493,153	-		CCNA_02353	0.77	+0.7
2,493,153	-		CCNA_02353	0.77	+1.0
2,493,185	+		CCNA_02353	0.84	-0.1
2,493,185	+		CCNA_02353	0.84	+0.8
2,493,193	-		CCNA_02353	0.86	+1.1
2,493,193	-		CCNA_02353	0.86	+0.7
2,493,193	-		CCNA_02353	0.86	+0.1
2,493,253	-				+0.6
2,493,260	+				+1.0
2,493,268	-				+1.6
2,493,276	-				+0.3
2,493,276	-				+0.1
2,493,291	-				-0.4
2,493,316	-				+1.0
2,493,368	+				+0.2
2,493,435	+				+0.6
2,493,438	+				+0.8
2,493,442	-				-2.3
2,493,443	-				+0.8
2,493,500	+				-0.0
2,493,502	-				-0.3
2,493,561	+				+0.6
2,493,569	+				+2.2
2,493,569	-				-0.7
2,493,607	-				+2.8
2,493,658	-				+1.3
2,493,689	-				-1.0
2,493,727	+		CCNA_02354	0.13	-1.0
2,493,730	-		CCNA_02354	0.14	+0.5
2,493,735	-		CCNA_02354	0.15	-0.4
2,493,769	-		CCNA_02354	0.21	-1.4
2,493,787	+		CCNA_02354	0.24	+2.2
2,493,787	+		CCNA_02354	0.24	-0.6