Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05285

Experiment: soil sample 1; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 1; outgrowth in LB
1,110,861	+		ABZR87_RS05280	0.73	+0.4
1,110,861	+		ABZR87_RS05280	0.73	-0.2
1,110,861	+		ABZR87_RS05280	0.73	+0.8
1,110,862	-		ABZR87_RS05280	0.73	-0.0
1,110,862	-		ABZR87_RS05280	0.73	-1.1
1,110,862	-		ABZR87_RS05280	0.73	-1.4
1,110,862	-		ABZR87_RS05280	0.73	-0.7
1,110,909	+		ABZR87_RS05280	0.75	+0.0
1,110,909	+		ABZR87_RS05280	0.75	-0.1
1,110,909	+		ABZR87_RS05280	0.75	+0.8
1,110,909	+		ABZR87_RS05280	0.75	+0.4
1,110,909	+		ABZR87_RS05280	0.75	-0.3
1,110,910	-		ABZR87_RS05280	0.75	-0.1
1,110,910	-		ABZR87_RS05280	0.75	-0.8
1,110,910	-		ABZR87_RS05280	0.75	+0.1
1,110,910	-		ABZR87_RS05280	0.75	+0.6
1,110,910	-		ABZR87_RS05280	0.75	+0.8
1,110,984	+		ABZR87_RS05280	0.79	-0.8
1,110,984	+		ABZR87_RS05280	0.79	-0.4
1,110,984	+		ABZR87_RS05280	0.79	+1.9
1,110,984	+		ABZR87_RS05280	0.79	+0.5
1,110,984	+		ABZR87_RS05280	0.79	-1.0
1,110,985	-		ABZR87_RS05280	0.79	-0.6
1,110,985	-		ABZR87_RS05280	0.79	-0.3
1,110,985	-		ABZR87_RS05280	0.79	+0.9
1,110,985	-		ABZR87_RS05280	0.79	+0.1
1,110,985	-		ABZR87_RS05280	0.79	+0.6
1,110,985	-		ABZR87_RS05280	0.79	+0.2
1,111,152	+		ABZR87_RS05280	0.88	+0.3
1,111,152	+		ABZR87_RS05280	0.88	+0.3
1,111,152	+		ABZR87_RS05280	0.88	+0.9
1,111,152	+		ABZR87_RS05280	0.88	+0.9
1,111,152	+		ABZR87_RS05280	0.88	+0.6
1,111,152	+		ABZR87_RS05280	0.88	+0.9
1,111,153	-		ABZR87_RS05280	0.88	+0.1
1,111,153	-		ABZR87_RS05280	0.88	-0.2
1,111,153	-		ABZR87_RS05280	0.88	-0.5
1,111,227	+				-0.3
1,111,227	+				+0.8
1,111,227	+				+0.3
1,111,227	+				+0.4
1,111,227	+				+0.5
1,111,228	-				+0.5
1,111,228	-				-0.0
1,111,228	-				-0.2
1,111,228	-				-0.6
1,111,228	-				+0.5
1,111,228	-				-0.4
1,111,323	+				-0.7
1,111,323	+				+0.5
1,111,323	+				-0.2
1,111,324	-				-1.3
1,111,324	-				+2.1
1,111,324	-				-0.1
1,111,324	-				-0.1
1,111,324	-				+1.1
1,111,401	-				+0.4
1,111,525	+				-1.3
1,111,525	+				-0.2
1,111,526	-				-0.4
1,111,550	+				-2.2
1,111,550	+				+0.1
1,111,550	+				-0.1
1,111,550	+				+0.2
1,111,551	-				+0.3
1,111,551	-				-0.6
1,111,638	+				-0.0
1,111,638	+				-1.1
1,111,638	+				+0.4
1,111,638	+				-0.4
1,111,638	+				-0.2
1,111,638	+				+0.5
1,111,638	+				-0.2
1,111,639	-				-0.0
1,111,639	-				-0.9
1,111,639	-				-0.1
1,111,639	-				-0.3
1,111,639	-				-0.3
1,111,639	-				+0.2
1,111,639	-				-1.1
1,111,741	+				-0.3
1,111,741	+				+0.4
1,111,741	+				-0.3
1,111,741	+				-1.0
1,111,741	+				-1.4
1,111,742	-				+0.1
1,111,742	-				-0.5
1,111,742	-				+0.1
1,111,742	-				-0.3
1,111,742	-				-0.6
1,111,823	+				-1.0
1,111,823	+				-0.0
1,111,824	-				-1.1
1,112,034	+		ABZR87_RS05285	0.23	-0.9
1,112,056	+		ABZR87_RS05285	0.25	-0.2
1,112,057	-		ABZR87_RS05285	0.25	-0.7
1,112,167	+		ABZR87_RS05285	0.36	-0.8
1,112,167	+		ABZR87_RS05285	0.36	+0.0
1,112,177	+		ABZR87_RS05285	0.37	-0.0
1,112,177	+		ABZR87_RS05285	0.37	-0.8
1,112,177	+		ABZR87_RS05285	0.37	-1.2
1,112,177	+		ABZR87_RS05285	0.37	-0.7
1,112,177	+		ABZR87_RS05285	0.37	-0.3
1,112,177	+		ABZR87_RS05285	0.37	-0.2
1,112,177	+		ABZR87_RS05285	0.37	+0.4
1,112,178	-		ABZR87_RS05285	0.37	-0.6
1,112,178	-		ABZR87_RS05285	0.37	-0.2
1,112,178	-		ABZR87_RS05285	0.37	-0.6
1,112,178	-		ABZR87_RS05285	0.37	-1.1
1,112,178	-		ABZR87_RS05285	0.37	-0.5
1,112,178	-		ABZR87_RS05285	0.37	-0.1
1,112,178	-		ABZR87_RS05285	0.37	+0.3
1,112,324	+		ABZR87_RS05285	0.51	+0.3
1,112,699	+		ABZR87_RS05285	0.87	-0.7
1,112,700	-		ABZR87_RS05285	0.88	-0.3
1,112,717	+		ABZR87_RS05285	0.89	-0.5
1,112,718	-		ABZR87_RS05285	0.89	-0.6
1,112,718	-		ABZR87_RS05285	0.89	-0.7
1,112,726	+				-0.8
1,112,726	+				-0.4
1,112,726	+				+0.5
1,112,727	-				+0.2
1,112,727	-				+0.8
1,112,727	-				+0.3
1,112,727	-				-0.8
1,112,727	-				+0.9
1,112,727	-				-0.7
1,112,727	-				+0.1
1,112,727	-				-0.1
1,112,727	-				-0.3
1,112,727	-				-0.5
1,112,788	+				-0.3
1,112,788	+				-1.5
1,112,789	-				-0.5
1,112,826	-				-0.3
1,112,934	+				-0.4
1,112,935	+				-0.4
1,112,935	+				+0.8
1,112,935	+				+0.2
1,112,935	+				-0.0
1,112,935	+				-0.1
1,112,935	+				-0.0
1,112,935	+				+1.3
1,112,935	+				-0.5
1,112,935	+				-0.5
1,112,935	+				+0.4
1,112,936	-				-0.8
1,112,936	-				+0.9
1,112,936	-				-0.5
1,112,936	-				+0.6
1,112,936	-				-1.3
1,112,936	-				-0.4
1,113,022	+		ABZR87_RS05290	0.18	-0.3
1,113,022	+		ABZR87_RS05290	0.18	-0.0
1,113,022	+		ABZR87_RS05290	0.18	+0.4
1,113,022	+		ABZR87_RS05290	0.18	-0.9
1,113,022	+		ABZR87_RS05290	0.18	-0.2
1,113,022	+		ABZR87_RS05290	0.18	-0.3
1,113,023	-		ABZR87_RS05290	0.18	+0.7
1,113,023	-		ABZR87_RS05290	0.18	-1.2
1,113,023	-		ABZR87_RS05290	0.18	-0.5
1,113,023	-		ABZR87_RS05290	0.18	-0.5
1,113,023	-		ABZR87_RS05290	0.18	-0.2
1,113,023	-		ABZR87_RS05290	0.18	+0.3
1,113,113	+		ABZR87_RS05290	0.29	+0.4
1,113,113	+		ABZR87_RS05290	0.29	-0.1
1,113,114	-		ABZR87_RS05290	0.29	+0.3
1,113,517	+		ABZR87_RS05290	0.74	-1.0
1,113,517	+		ABZR87_RS05290	0.74	-0.7
1,113,517	+		ABZR87_RS05290	0.74	-0.2
1,113,517	+		ABZR87_RS05290	0.74	-2.2
1,113,517	+		ABZR87_RS05290	0.74	+0.3
1,113,517	+		ABZR87_RS05290	0.74	+0.8
1,113,518	-		ABZR87_RS05290	0.74	-2.3
1,113,518	-		ABZR87_RS05290	0.74	+0.6
1,113,518	-		ABZR87_RS05290	0.74	-0.5
1,113,518	-		ABZR87_RS05290	0.74	-0.7
1,113,518	-		ABZR87_RS05290	0.74	-0.9
1,113,529	+		ABZR87_RS05290	0.75	+0.7
1,113,529	+		ABZR87_RS05290	0.75	-0.9
1,113,529	+		ABZR87_RS05290	0.75	-0.9
1,113,529	+		ABZR87_RS05290	0.75	-0.3
1,113,530	-		ABZR87_RS05290	0.75	-1.4
1,113,530	-		ABZR87_RS05290	0.75	-1.2
1,113,530	-		ABZR87_RS05290	0.75	-1.2
1,113,530	-		ABZR87_RS05290	0.75	-0.8
1,113,733	+				+0.9
1,113,733	+				+0.2
1,113,733	+				+0.9
1,113,733	+				-0.9
1,113,733	+				-0.8
1,113,733	+				-0.4
1,113,733	+				-0.2
1,113,734	-				+1.1
1,113,734	-				-0.7
1,113,734	-				+1.2
1,113,734	-				-0.8
1,113,769	-				-1.0
1,113,769	-				-0.7
1,113,769	-				-0.0
1,113,769	-				+1.0
1,113,802	-				-1.0
1,113,802	-				+0.9