Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0033

Experiment: Valeric 25 mM; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Valeric 25 mM; anaerobic
31,539	+		Rru_B0031	0.70	-2.2
31,539	+		Rru_B0031	0.70	-1.6
31,539	+		Rru_B0031	0.70	+1.0
31,539	+		Rru_B0031	0.70	-0.4
31,540	-		Rru_B0031	0.70	-1.3
31,540	-		Rru_B0031	0.70	+0.4
31,540	-		Rru_B0031	0.70	-1.3
31,540	-		Rru_B0031	0.70	-0.1
31,548	+		Rru_B0031	0.71	+0.5
31,548	+		Rru_B0031	0.71	-1.2
31,548	+		Rru_B0031	0.71	+2.3
31,548	+		Rru_B0031	0.71	-0.3
31,548	+		Rru_B0031	0.71	-3.5
31,549	-		Rru_B0031	0.71	-1.0
31,549	-		Rru_B0031	0.71	-2.3
31,549	-		Rru_B0031	0.71	-4.0
31,549	-		Rru_B0031	0.71	-2.0
31,626	+		Rru_B0031	0.76	-0.3
31,626	+		Rru_B0031	0.76	-1.2
31,626	+		Rru_B0031	0.76	-0.4
31,626	+		Rru_B0031	0.76	-3.4
31,626	+		Rru_B0031	0.76	-0.8
31,626	+		Rru_B0031	0.76	+0.4
31,626	+		Rru_B0031	0.76	+0.5
31,627	-		Rru_B0031	0.76	-3.1
31,627	-		Rru_B0031	0.76	-3.0
31,627	-		Rru_B0031	0.76	-1.6
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	-0.3
31,627	-		Rru_B0031	0.76	+1.0
31,627	-		Rru_B0031	0.76	+0.3
31,627	-		Rru_B0031	0.76	+0.6
31,627	-		Rru_B0031	0.76	-2.8
31,627	-		Rru_B0031	0.76	+1.2
31,627	-		Rru_B0031	0.76	+0.5
31,627	-		Rru_B0031	0.76	-3.6
31,627	-		Rru_B0031	0.76	+0.9
31,854	+				-1.1
31,938	+				+0.8
31,939	-				+1.3
31,951	+				+0.6
31,951	+				-2.3
31,951	+				-0.6
31,951	+				-0.4
31,951	+				-1.0
31,952	-				-1.4
31,952	-				+0.2
31,952	-				+0.5
31,953	+				-1.0
31,954	-				-4.2
31,971	+				+0.9
31,971	+				+0.8
31,971	+				-0.3
31,971	+				-0.9
31,971	+				-0.3
31,971	+				-4.5
31,971	+				+0.4
31,972	-				+1.6
31,972	-				+0.4
31,972	-				+0.9
31,972	-				+0.5
31,972	-				-2.3
31,972	-				+0.7
32,013	+				+0.9
32,013	+				+2.1
32,014	-				-2.0
32,029	+				+0.2
32,030	-				-1.0
32,030	-				+0.9
32,058	+				-1.0
32,059	-				-0.1
32,059	-				-1.8
32,128	+		Rru_B0032	0.17	+1.1
32,129	-		Rru_B0032	0.17	+0.7
32,129	-		Rru_B0032	0.17	-2.8
32,180	+		Rru_B0032	0.34	-3.0
32,180	+		Rru_B0032	0.34	-2.9
32,180	+		Rru_B0032	0.34	+1.4
32,180	+		Rru_B0032	0.34	-3.1
32,180	+		Rru_B0032	0.34	+0.9
32,181	-		Rru_B0032	0.35	+0.4
32,181	-		Rru_B0032	0.35	-2.9
32,181	-		Rru_B0032	0.35	+1.9
32,181	-		Rru_B0032	0.35	-2.1
32,239	+		Rru_B0032	0.54	+1.6
32,239	+		Rru_B0032	0.54	-3.4
32,240	-		Rru_B0032	0.54	-2.1
32,381	+				-1.0
32,381	+				+0.3
32,381	+				+0.8
32,381	+				+0.3
32,381	+				+0.1
32,382	-				-3.2
32,417	+				+0.9
32,418	-				+0.2
32,492	+				-0.5
32,502	-				+1.2
32,711	-		Rru_B0033	0.32	-0.2
32,711	-		Rru_B0033	0.32	-0.8
32,764	+		Rru_B0033	0.40	+0.2
32,819	+		Rru_B0033	0.48	-3.0
32,819	+		Rru_B0033	0.48	+1.7
32,820	-		Rru_B0033	0.48	-3.3
32,820	-		Rru_B0033	0.48	+0.2
32,828	+		Rru_B0033	0.49	-2.3
32,828	+		Rru_B0033	0.49	-4.8
32,828	+		Rru_B0033	0.49	-0.4
32,829	-		Rru_B0033	0.49	+0.0
32,830	+		Rru_B0033	0.49	-3.0
32,831	-		Rru_B0033	0.49	-1.4
32,831	-		Rru_B0033	0.49	-3.4
32,831	-		Rru_B0033	0.49	-0.8
32,831	-		Rru_B0033	0.49	-1.7
32,831	-		Rru_B0033	0.49	-3.5
32,851	+		Rru_B0033	0.52	+0.0
32,851	+		Rru_B0033	0.52	-1.9
32,851	+		Rru_B0033	0.52	+1.7
32,852	-		Rru_B0033	0.52	-0.3
32,852	-		Rru_B0033	0.52	-2.4
32,867	+		Rru_B0033	0.55	+0.1
32,867	+		Rru_B0033	0.55	+0.2
32,868	-		Rru_B0033	0.55	-1.9
32,868	-		Rru_B0033	0.55	-0.3
32,869	+		Rru_B0033	0.55	+1.5
32,869	+		Rru_B0033	0.55	-3.2
32,869	+		Rru_B0033	0.55	-3.2
32,869	+		Rru_B0033	0.55	-3.7
32,869	+		Rru_B0033	0.55	-0.6
32,870	-		Rru_B0033	0.55	-0.1
32,870	-		Rru_B0033	0.55	+0.8
32,870	-		Rru_B0033	0.55	-1.8
32,870	-		Rru_B0033	0.55	-0.7
32,881	+		Rru_B0033	0.56	-3.9
32,881	+		Rru_B0033	0.56	+0.4
32,881	+		Rru_B0033	0.56	+0.4
32,881	+		Rru_B0033	0.56	+0.3
32,881	+		Rru_B0033	0.56	+0.5
32,881	+		Rru_B0033	0.56	-1.2
32,882	-		Rru_B0033	0.57	-3.5
32,929	+		Rru_B0033	0.63	+0.3
32,929	+		Rru_B0033	0.63	-0.7
32,929	+		Rru_B0033	0.63	-0.8
32,930	-		Rru_B0033	0.63	-0.9
32,930	-		Rru_B0033	0.63	-1.0
32,930	-		Rru_B0033	0.63	+0.8
32,930	-		Rru_B0033	0.63	+1.5
32,930	-		Rru_B0033	0.63	-0.4
33,028	+		Rru_B0033	0.77	+0.2
33,029	-		Rru_B0033	0.77	+0.2
33,029	-		Rru_B0033	0.77	-0.6
33,029	-		Rru_B0033	0.77	+0.4
33,029	-		Rru_B0033	0.77	-3.8
33,029	-		Rru_B0033	0.77	-3.2
33,201	-				-1.9
33,247	+				-0.0
33,248	-				+0.7
33,271	+				-0.2
33,273	+				-0.8
33,275	+				-4.3
33,275	+				+1.2
33,275	+				-1.8
33,276	-				+1.0
33,276	-				-1.2
33,276	-				-0.4
33,278	+				-0.7
33,285	+				-0.4
33,286	-				-4.2
33,287	+				-0.6
33,288	-				+0.2
33,568	-				-0.1
33,672	+		Rru_B0035	0.36	-3.1
33,672	+		Rru_B0035	0.36	+0.6
33,672	+		Rru_B0035	0.36	+1.4
33,672	+		Rru_B0035	0.36	-3.1
33,673	-		Rru_B0035	0.37	-0.9
33,673	-		Rru_B0035	0.37	+0.2
33,674	+		Rru_B0035	0.37	+1.2
33,674	+		Rru_B0035	0.37	-0.1
33,674	+		Rru_B0035	0.37	+1.4
33,674	+		Rru_B0035	0.37	-1.7
33,674	+		Rru_B0035	0.37	-0.6
33,674	+		Rru_B0035	0.37	-0.4
33,675	-		Rru_B0035	0.37	+1.0
33,675	-		Rru_B0035	0.37	+0.4
33,675	-		Rru_B0035	0.37	+0.3
33,675	-		Rru_B0035	0.37	-3.3
33,675	-		Rru_B0035	0.37	-1.6
33,675	-		Rru_B0035	0.37	+1.4
33,675	-		Rru_B0035	0.37	-3.0
33,675	-		Rru_B0035	0.37	-0.2
33,675	-		Rru_B0035	0.37	-0.9
33,675	-		Rru_B0035	0.37	-4.7
33,675	-		Rru_B0035	0.37	-0.5
33,708	+		Rru_B0035	0.46	-2.6
33,708	+		Rru_B0035	0.46	-0.1
33,708	+		Rru_B0035	0.46	+1.6
33,709	-		Rru_B0035	0.46	-2.6
33,709	-		Rru_B0035	0.46	-3.8
33,709	-		Rru_B0035	0.46	+0.4
33,709	-		Rru_B0035	0.46	-0.1
33,714	+		Rru_B0035	0.47	+0.5
33,714	+		Rru_B0035	0.47	+0.6
33,714	+		Rru_B0035	0.47	+0.5
33,715	-		Rru_B0035	0.48	-0.1
33,715	-		Rru_B0035	0.48	-2.6
33,715	-		Rru_B0035	0.48	-4.4
33,715	-		Rru_B0035	0.48	-1.4
33,863	+		Rru_B0035	0.86	-0.2
33,863	+		Rru_B0035	0.86	+0.7
33,863	+		Rru_B0035	0.86	+0.9
33,863	+		Rru_B0035	0.86	+0.2
33,863	+		Rru_B0035	0.86	-2.5
33,864	-		Rru_B0035	0.86	+1.3
33,864	-		Rru_B0035	0.86	+0.1
33,864	-		Rru_B0035	0.86	+1.5
33,928	+				-4.8
33,928	+				-1.4
33,928	+				-0.8
33,929	-				+0.2
33,929	-				+1.0
33,930	+				+0.7
33,930	+				+0.3
33,930	+				-1.7
33,931	-				-4.7
33,931	-				-0.2
33,931	-				-1.7
34,001	+				+0.4
34,001	+				-0.6
34,001	+				-0.2
34,001	+				-5.0
34,001	+				-2.1
34,002	-				-0.2
34,002	-				+0.8
34,002	-				+0.7
34,002	-				-0.3
34,002	-				+1.4
34,002	-				-4.4
34,092	+		Rru_B0036	0.13	-0.3
34,092	+		Rru_B0036	0.13	-4.8
34,092	+		Rru_B0036	0.13	-1.2
34,093	-		Rru_B0036	0.13	+0.4
34,121	+		Rru_B0036	0.15	-2.8
34,121	+		Rru_B0036	0.15	-0.2
34,121	+		Rru_B0036	0.15	+1.2