Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0031

Experiment: Valeric 25 mM; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Valeric 25 mM; anaerobic
29,653	-		Rru_B0030	0.48	-1.2
29,690	+		Rru_B0030	0.50	+1.4
29,731	+		Rru_B0030	0.53	-0.7
29,731	+		Rru_B0030	0.53	+0.1
29,731	+		Rru_B0030	0.53	+0.2
29,732	-		Rru_B0030	0.53	+2.9
29,732	-		Rru_B0030	0.53	+0.4
29,732	-		Rru_B0030	0.53	+0.0
29,737	+		Rru_B0030	0.54	-1.8
29,737	+		Rru_B0030	0.54	+1.6
29,737	+		Rru_B0030	0.54	-0.3
29,737	+		Rru_B0030	0.54	-3.8
29,738	-		Rru_B0030	0.54	-2.9
29,738	-		Rru_B0030	0.54	+0.2
29,738	-		Rru_B0030	0.54	+0.6
29,738	-		Rru_B0030	0.54	-2.3
29,738	-		Rru_B0030	0.54	-2.2
29,738	-		Rru_B0030	0.54	+1.5
29,738	-		Rru_B0030	0.54	-3.2
29,738	-		Rru_B0030	0.54	-0.3
29,738	-		Rru_B0030	0.54	-2.8
29,738	-		Rru_B0030	0.54	-0.7
29,738	-		Rru_B0030	0.54	+0.7
29,840	+		Rru_B0030	0.61	+0.8
29,854	+		Rru_B0030	0.62	-1.3
29,854	+		Rru_B0030	0.62	-5.1
29,855	-		Rru_B0030	0.62	+0.3
29,855	-		Rru_B0030	0.62	-2.1
29,855	-		Rru_B0030	0.62	-2.7
29,855	-		Rru_B0030	0.62	+0.8
29,855	-		Rru_B0030	0.62	+0.3
29,855	-		Rru_B0030	0.62	-4.4
29,855	-		Rru_B0030	0.62	-2.2
29,954	+		Rru_B0030	0.69	-3.9
29,954	+		Rru_B0030	0.69	+1.4
29,954	+		Rru_B0030	0.69	+0.5
29,954	+		Rru_B0030	0.69	-0.2
29,955	-		Rru_B0030	0.70	-4.0
29,955	-		Rru_B0030	0.70	-3.8
29,955	-		Rru_B0030	0.70	-0.8
29,955	-		Rru_B0030	0.70	-1.8
29,955	-		Rru_B0030	0.70	-2.2
29,955	-		Rru_B0030	0.70	-1.6
29,956	+		Rru_B0030	0.70	-1.2
29,956	+		Rru_B0030	0.70	+0.1
29,956	+		Rru_B0030	0.70	-1.9
29,956	+		Rru_B0030	0.70	+0.3
29,956	+		Rru_B0030	0.70	+1.0
29,956	+		Rru_B0030	0.70	-1.0
29,957	-		Rru_B0030	0.70	+0.4
29,957	-		Rru_B0030	0.70	-0.4
29,957	-		Rru_B0030	0.70	+0.8
29,957	-		Rru_B0030	0.70	+1.4
29,957	-		Rru_B0030	0.70	-4.0
29,957	-		Rru_B0030	0.70	+0.8
29,957	-		Rru_B0030	0.70	-2.2
30,025	+		Rru_B0030	0.75	-3.7
30,026	-		Rru_B0030	0.75	+0.9
30,071	+		Rru_B0030	0.78	-2.7
30,071	+		Rru_B0030	0.78	+1.3
30,083	-		Rru_B0030	0.79	+0.9
30,113	+		Rru_B0030	0.81	-0.1
30,114	-		Rru_B0030	0.81	+0.7
30,114	-		Rru_B0030	0.81	-2.2
30,150	-		Rru_B0030	0.84	-3.4
30,151	+		Rru_B0030	0.84	-5.1
30,151	+		Rru_B0030	0.84	-0.2
30,151	+		Rru_B0030	0.84	+0.1
30,151	+		Rru_B0030	0.84	+2.4
30,152	-		Rru_B0030	0.84	-0.2
30,152	-		Rru_B0030	0.84	-3.4
30,174	+		Rru_B0030	0.85	+0.6
30,174	+		Rru_B0030	0.85	-0.1
30,174	+		Rru_B0030	0.85	+0.2
30,175	-		Rru_B0030	0.85	+0.8
30,175	-		Rru_B0030	0.85	-0.4
30,208	+		Rru_B0030	0.88	+0.0
30,208	+		Rru_B0030	0.88	+2.3
30,209	-		Rru_B0030	0.88	-3.4
30,209	-		Rru_B0030	0.88	-0.7
30,211	+		Rru_B0030	0.88	+1.1
30,211	+		Rru_B0030	0.88	+0.5
30,211	+		Rru_B0030	0.88	-3.8
30,211	+		Rru_B0030	0.88	-1.4
30,211	+		Rru_B0030	0.88	-0.5
30,211	+		Rru_B0030	0.88	+0.4
30,211	+		Rru_B0030	0.88	+0.3
30,212	-		Rru_B0030	0.88	-0.4
30,277	+				-1.9
30,277	+				-0.6
30,278	-				+0.1
30,325	+				-1.7
30,337	+				+1.6
30,337	+				-0.7
30,369	-				+2.3
30,369	-				+1.6
30,369	-				+1.0
30,371	+				+0.0
30,385	-				-2.3
30,432	+				-3.6
30,432	+				+2.0
30,483	+				-0.3
30,483	+				-4.8
30,484	-				-0.2
30,484	-				-2.4
30,484	-				-0.8
30,677	+		Rru_B0031	0.14	-3.4
30,677	+		Rru_B0031	0.14	-5.1
30,677	+		Rru_B0031	0.14	+1.0
30,677	+		Rru_B0031	0.14	-3.3
30,677	+		Rru_B0031	0.14	-0.7
30,678	-		Rru_B0031	0.14	-0.3
30,954	+		Rru_B0031	0.32	+0.6
30,955	-		Rru_B0031	0.32	-1.6
30,955	-		Rru_B0031	0.32	+0.4
31,102	+		Rru_B0031	0.42	+0.4
31,102	+		Rru_B0031	0.42	-0.4
31,103	-		Rru_B0031	0.42	+0.6
31,103	-		Rru_B0031	0.42	-0.0
31,131	+		Rru_B0031	0.44	-2.6
31,131	+		Rru_B0031	0.44	-0.3
31,131	+		Rru_B0031	0.44	+0.5
31,132	-		Rru_B0031	0.44	+1.5
31,132	-		Rru_B0031	0.44	-3.7
31,132	-		Rru_B0031	0.44	+0.8
31,291	-		Rru_B0031	0.54	-0.0
31,291	-		Rru_B0031	0.54	-3.8
31,317	+		Rru_B0031	0.56	-0.8
31,318	-		Rru_B0031	0.56	+0.5
31,318	-		Rru_B0031	0.56	-2.3
31,332	+		Rru_B0031	0.57	-2.1
31,332	+		Rru_B0031	0.57	+2.0
31,332	+		Rru_B0031	0.57	-0.1
31,332	+		Rru_B0031	0.57	-1.0
31,332	+		Rru_B0031	0.57	+0.6
31,332	+		Rru_B0031	0.57	-0.9
31,332	+		Rru_B0031	0.57	-0.3
31,395	+		Rru_B0031	0.61	-1.2
31,395	+		Rru_B0031	0.61	-1.8
31,396	-		Rru_B0031	0.61	+0.3
31,539	+		Rru_B0031	0.70	-2.2
31,539	+		Rru_B0031	0.70	-1.6
31,539	+		Rru_B0031	0.70	+1.0
31,539	+		Rru_B0031	0.70	-0.4
31,540	-		Rru_B0031	0.70	-1.3
31,540	-		Rru_B0031	0.70	+0.4
31,540	-		Rru_B0031	0.70	-1.3
31,540	-		Rru_B0031	0.70	-0.1
31,548	+		Rru_B0031	0.71	+0.5
31,548	+		Rru_B0031	0.71	-1.2
31,548	+		Rru_B0031	0.71	+2.3
31,548	+		Rru_B0031	0.71	-0.3
31,548	+		Rru_B0031	0.71	-3.5
31,549	-		Rru_B0031	0.71	-1.0
31,549	-		Rru_B0031	0.71	-2.3
31,549	-		Rru_B0031	0.71	-4.0
31,549	-		Rru_B0031	0.71	-2.0
31,626	+		Rru_B0031	0.76	-0.3
31,626	+		Rru_B0031	0.76	-1.2
31,626	+		Rru_B0031	0.76	-0.4
31,626	+		Rru_B0031	0.76	-3.4
31,626	+		Rru_B0031	0.76	-0.8
31,626	+		Rru_B0031	0.76	+0.4
31,626	+		Rru_B0031	0.76	+0.5
31,627	-		Rru_B0031	0.76	-3.1
31,627	-		Rru_B0031	0.76	-3.0
31,627	-		Rru_B0031	0.76	-1.6
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	-0.3
31,627	-		Rru_B0031	0.76	+1.0
31,627	-		Rru_B0031	0.76	+0.3
31,627	-		Rru_B0031	0.76	+0.6
31,627	-		Rru_B0031	0.76	-2.8
31,627	-		Rru_B0031	0.76	+1.2
31,627	-		Rru_B0031	0.76	+0.5
31,627	-		Rru_B0031	0.76	-3.6
31,627	-		Rru_B0031	0.76	+0.9
31,854	+				-1.1
31,938	+				+0.8
31,939	-				+1.3
31,951	+				+0.6
31,951	+				-2.3
31,951	+				-0.6
31,951	+				-0.4
31,951	+				-1.0
31,952	-				-1.4
31,952	-				+0.2
31,952	-				+0.5
31,953	+				-1.0
31,954	-				-4.2
31,971	+				+0.9
31,971	+				+0.8
31,971	+				-0.3
31,971	+				-0.9
31,971	+				-0.3
31,971	+				-4.5
31,971	+				+0.4
31,972	-				+1.6
31,972	-				+0.4
31,972	-				+0.9
31,972	-				+0.5
31,972	-				-2.3
31,972	-				+0.7
32,013	+				+0.9
32,013	+				+2.1
32,014	-				-2.0
32,029	+				+0.2
32,030	-				-1.0
32,030	-				+0.9
32,058	+				-1.0
32,059	-				-0.1
32,059	-				-1.8
32,128	+		Rru_B0032	0.17	+1.1
32,129	-		Rru_B0032	0.17	+0.7
32,129	-		Rru_B0032	0.17	-2.8
32,180	+		Rru_B0032	0.34	-3.0
32,180	+		Rru_B0032	0.34	-2.9
32,180	+		Rru_B0032	0.34	+1.4
32,180	+		Rru_B0032	0.34	-3.1
32,180	+		Rru_B0032	0.34	+0.9
32,181	-		Rru_B0032	0.35	+0.4
32,181	-		Rru_B0032	0.35	-2.9
32,181	-		Rru_B0032	0.35	+1.9
32,181	-		Rru_B0032	0.35	-2.1
32,239	+		Rru_B0032	0.54	+1.6
32,239	+		Rru_B0032	0.54	-3.4
32,240	-		Rru_B0032	0.54	-2.1
32,381	+				-1.0
32,381	+				+0.3
32,381	+				+0.8
32,381	+				+0.3
32,381	+				+0.1
32,382	-				-3.2
32,417	+				+0.9
32,418	-				+0.2
32,492	+				-0.5
32,502	-				+1.2
32,711	-		Rru_B0033	0.32	-0.2
32,711	-		Rru_B0033	0.32	-0.8
32,764	+		Rru_B0033	0.40	+0.2
32,819	+		Rru_B0033	0.48	-3.0
32,819	+		Rru_B0033	0.48	+1.7
32,820	-		Rru_B0033	0.48	-3.3
32,820	-		Rru_B0033	0.48	+0.2
32,828	+		Rru_B0033	0.49	-2.3
32,828	+		Rru_B0033	0.49	-4.8
32,828	+		Rru_B0033	0.49	-0.4
32,829	-		Rru_B0033	0.49	+0.0
32,830	+		Rru_B0033	0.49	-3.0
32,831	-		Rru_B0033	0.49	-1.4
32,831	-		Rru_B0033	0.49	-3.4
32,831	-		Rru_B0033	0.49	-0.8
32,831	-		Rru_B0033	0.49	-1.7
32,831	-		Rru_B0033	0.49	-3.5
32,851	+		Rru_B0033	0.52	+0.0
32,851	+		Rru_B0033	0.52	-1.9
32,851	+		Rru_B0033	0.52	+1.7
32,852	-		Rru_B0033	0.52	-0.3
32,852	-		Rru_B0033	0.52	-2.4
32,867	+		Rru_B0033	0.55	+0.1
32,867	+		Rru_B0033	0.55	+0.2
32,868	-		Rru_B0033	0.55	-1.9
32,868	-		Rru_B0033	0.55	-0.3
32,869	+		Rru_B0033	0.55	+1.5
32,869	+		Rru_B0033	0.55	-3.2
32,869	+		Rru_B0033	0.55	-3.2
32,869	+		Rru_B0033	0.55	-3.7
32,869	+		Rru_B0033	0.55	-0.6
32,870	-		Rru_B0033	0.55	-0.1
32,870	-		Rru_B0033	0.55	+0.8
32,870	-		Rru_B0033	0.55	-1.8
32,870	-		Rru_B0033	0.55	-0.7
32,881	+		Rru_B0033	0.56	-3.9
32,881	+		Rru_B0033	0.56	+0.4
32,881	+		Rru_B0033	0.56	+0.4
32,881	+		Rru_B0033	0.56	+0.3
32,881	+		Rru_B0033	0.56	+0.5
32,881	+		Rru_B0033	0.56	-1.2
32,882	-		Rru_B0033	0.57	-3.5
32,929	+		Rru_B0033	0.63	+0.3
32,929	+		Rru_B0033	0.63	-0.7
32,929	+		Rru_B0033	0.63	-0.8
32,930	-		Rru_B0033	0.63	-0.9
32,930	-		Rru_B0033	0.63	-1.0
32,930	-		Rru_B0033	0.63	+0.8
32,930	-		Rru_B0033	0.63	+1.5
32,930	-		Rru_B0033	0.63	-0.4