Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2092

Experiment: Thallium(I) acetate 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.00390625 mg/ml
2,172,286	-	ndhF3	Synpcc7942_2091	0.47	-4.0
2,172,353	+	ndhF3	Synpcc7942_2091	0.50	-3.3
2,172,361	-	ndhF3	Synpcc7942_2091	0.51	-1.5
2,172,361	-	ndhF3	Synpcc7942_2091	0.51	-0.6
2,172,378	+	ndhF3	Synpcc7942_2091	0.52	-1.5
2,172,384	+	ndhF3	Synpcc7942_2091	0.52	-2.8
2,172,405	+	ndhF3	Synpcc7942_2091	0.53	-1.5
2,172,501	+	ndhF3	Synpcc7942_2091	0.58	-0.5
2,172,518	+	ndhF3	Synpcc7942_2091	0.59	-1.5
2,172,526	-				-0.5
2,172,526	-	ndhF3	Synpcc7942_2091	0.60	-1.5
2,172,526	-	ndhF3	Synpcc7942_2091	0.60	-2.8
2,172,526	-	ndhF3	Synpcc7942_2091	0.60	-2.0
2,172,559	+				-0.5
2,172,565	-	ndhF3	Synpcc7942_2091	0.62	-0.5
2,172,590	-	ndhF3	Synpcc7942_2091	0.63	-3.8
2,172,616	-	ndhF3	Synpcc7942_2091	0.64	-0.5
2,172,616	-	ndhF3	Synpcc7942_2091	0.64	+0.5
2,172,627	-	ndhF3	Synpcc7942_2091	0.65	-1.0
2,172,655	-	ndhF3	Synpcc7942_2091	0.67	-2.8
2,172,715	-	ndhF3	Synpcc7942_2091	0.70	-1.5
2,172,725	+	ndhF3	Synpcc7942_2091	0.70	-2.8
2,172,786	-	ndhF3	Synpcc7942_2091	0.74	-0.1
2,172,839	+				-1.5
2,172,845	+	ndhF3	Synpcc7942_2091	0.77	-3.7
2,172,847	-	ndhF3	Synpcc7942_2091	0.77	+0.9
2,172,853	-	ndhF3	Synpcc7942_2091	0.77	-1.5
2,172,895	-	ndhF3	Synpcc7942_2091	0.80	-0.5
2,172,922	+	ndhF3	Synpcc7942_2091	0.81	-2.8
2,172,927	+	ndhF3	Synpcc7942_2091	0.81	-2.4
2,172,955	-	ndhF3	Synpcc7942_2091	0.83	-0.0
2,172,955	-	ndhF3	Synpcc7942_2091	0.83	+0.1
2,172,973	-	ndhF3	Synpcc7942_2091	0.84	+1.1
2,173,094	-				-2.8
2,173,113	+				-2.0
2,173,113	+				-2.3
2,173,142	-				-3.1
2,173,148	-				-1.5
2,173,167	+				-2.0
2,173,167	+				-2.0
2,173,175	-				+1.5
2,173,244	+				-1.9
2,173,246	+				-2.8
2,173,269	-				-0.5
2,173,290	-				-2.5
2,173,317	-				-2.8
2,173,319	+				+0.2
2,173,319	+				+0.5
2,173,345	-				-0.5
2,173,345	-				-1.5
2,173,458	+	ndhD3	Synpcc7942_2092	0.12	-1.8
2,173,594	+	ndhD3	Synpcc7942_2092	0.20	-0.5
2,173,597	+	ndhD3	Synpcc7942_2092	0.21	-2.5
2,173,677	+	ndhD3	Synpcc7942_2092	0.26	+1.9
2,173,691	-	ndhD3	Synpcc7942_2092	0.27	-1.0
2,173,701	-	ndhD3	Synpcc7942_2092	0.27	-0.5
2,173,832	+	ndhD3	Synpcc7942_2092	0.36	-1.6
2,173,832	+	ndhD3	Synpcc7942_2092	0.36	-0.3
2,173,840	-	ndhD3	Synpcc7942_2092	0.36	-1.5
2,173,873	+	ndhD3	Synpcc7942_2092	0.38	-2.8
2,173,873	+	ndhD3	Synpcc7942_2092	0.38	-2.8
2,173,873	+	ndhD3	Synpcc7942_2092	0.38	+0.5
2,173,881	-	ndhD3	Synpcc7942_2092	0.39	-2.3
2,173,943	+	ndhD3	Synpcc7942_2092	0.43	-0.9
2,173,951	-	ndhD3	Synpcc7942_2092	0.44	-0.6
2,173,975	-	ndhD3	Synpcc7942_2092	0.45	-2.5
2,174,007	-	ndhD3	Synpcc7942_2092	0.47	+0.3
2,174,007	-	ndhD3	Synpcc7942_2092	0.47	-2.5
2,174,031	+	ndhD3	Synpcc7942_2092	0.49	-3.0
2,174,031	+	ndhD3	Synpcc7942_2092	0.49	-0.5
2,174,031	+	ndhD3	Synpcc7942_2092	0.49	-2.0
2,174,039	-	ndhD3	Synpcc7942_2092	0.49	-1.5
2,174,039	-	ndhD3	Synpcc7942_2092	0.49	-2.5
2,174,053	-	ndhD3	Synpcc7942_2092	0.50	-2.3
2,174,100	-	ndhD3	Synpcc7942_2092	0.53	-0.9
2,174,121	+	ndhD3	Synpcc7942_2092	0.55	-0.0
2,174,131	-	ndhD3	Synpcc7942_2092	0.55	-1.5
2,174,131	-	ndhD3	Synpcc7942_2092	0.55	-1.0
2,174,131	-	ndhD3	Synpcc7942_2092	0.55	+0.5
2,174,134	+	ndhD3	Synpcc7942_2092	0.55	-3.0
2,174,134	+	ndhD3	Synpcc7942_2092	0.55	+0.5
2,174,154	-	ndhD3	Synpcc7942_2092	0.57	+0.5
2,174,154	-	ndhD3	Synpcc7942_2092	0.57	+1.1
2,174,154	-	ndhD3	Synpcc7942_2092	0.57	-0.7
2,174,231	+	ndhD3	Synpcc7942_2092	0.62	-2.8
2,174,231	+	ndhD3	Synpcc7942_2092	0.62	-3.0
2,174,245	-	ndhD3	Synpcc7942_2092	0.63	-3.0
2,174,299	-	ndhD3	Synpcc7942_2092	0.66	-2.0
2,174,318	-	ndhD3	Synpcc7942_2092	0.67	-0.5
2,174,328	-	ndhD3	Synpcc7942_2092	0.68	-2.8
2,174,329	-	ndhD3	Synpcc7942_2092	0.68	-2.0
2,174,354	+	ndhD3	Synpcc7942_2092	0.70	-1.5
2,174,393	+	ndhD3	Synpcc7942_2092	0.72	-3.5
2,174,527	-	ndhD3	Synpcc7942_2092	0.81	-2.8
2,174,548	-	ndhD3	Synpcc7942_2092	0.82	-2.0
2,174,626	-	ndhD3	Synpcc7942_2092	0.87	+0.1
2,174,660	+	ndhD3	Synpcc7942_2092	0.89	-2.0
2,174,669	-				-0.5
2,174,669	-				-0.9
2,174,689	-				-1.0
2,174,713	+				-2.8
2,174,764	+				+1.5
2,174,795	-				-2.3
2,174,795	-				-2.0
2,174,826	-				+0.5
2,174,835	+				-1.5
2,174,872	+				-1.5
2,174,895	-				-1.5
2,174,904	+				-1.5
2,174,912	-				-3.0
2,174,919	+				+0.5
2,174,927	-				-1.0
2,174,946	-				-2.0
2,174,952	+				-2.0
2,174,960	-				-2.8
2,174,979	+				-1.0
2,175,007	+	chpY	Synpcc7942_2093	0.11	-0.5
2,175,007	+	chpY	Synpcc7942_2093	0.11	-3.3
2,175,007	+	chpY	Synpcc7942_2093	0.11	-4.5
2,175,007	+	chpY	Synpcc7942_2093	0.11	-0.9
2,175,007	+	chpY	Synpcc7942_2093	0.11	-1.8
2,175,007	+	chpY	Synpcc7942_2093	0.11	-2.0
2,175,007	+	chpY	Synpcc7942_2093	0.11	-1.0
2,175,015	-	chpY	Synpcc7942_2093	0.11	-3.6
2,175,132	-	chpY	Synpcc7942_2093	0.20	-1.5
2,175,196	+	chpY	Synpcc7942_2093	0.25	-1.5
2,175,204	-	chpY	Synpcc7942_2093	0.26	-0.5
2,175,235	+	chpY	Synpcc7942_2093	0.28	-2.8
2,175,253	+	chpY	Synpcc7942_2093	0.30	-1.7
2,175,253	-	chpY	Synpcc7942_2093	0.30	-2.6
2,175,319	+	chpY	Synpcc7942_2093	0.35	-2.8
2,175,320	+	chpY	Synpcc7942_2093	0.35	-0.9
2,175,351	+	chpY	Synpcc7942_2093	0.37	-3.3
2,175,359	-	chpY	Synpcc7942_2093	0.38	-2.5
2,175,386	+	chpY	Synpcc7942_2093	0.40	-2.5
2,175,422	+	chpY	Synpcc7942_2093	0.43	-1.5
2,175,427	+	chpY	Synpcc7942_2093	0.43	+0.2
2,175,435	-	chpY	Synpcc7942_2093	0.44	-2.5
2,175,464	-	chpY	Synpcc7942_2093	0.46	-2.0
2,175,469	-	chpY	Synpcc7942_2093	0.46	-2.8
2,175,478	-	chpY	Synpcc7942_2093	0.47	-2.0
2,175,496	+	chpY	Synpcc7942_2093	0.48	-2.9
2,175,504	-	chpY	Synpcc7942_2093	0.49	-2.0
2,175,631	-	chpY	Synpcc7942_2093	0.59	-0.1
2,175,635	+	chpY	Synpcc7942_2093	0.59	-1.1
2,175,681	+	chpY	Synpcc7942_2093	0.63	-1.5
2,175,681	+	chpY	Synpcc7942_2093	0.63	-1.2
2,175,709	+	chpY	Synpcc7942_2093	0.65	-1.0
2,175,712	-	chpY	Synpcc7942_2093	0.65	-2.8
2,175,714	+	chpY	Synpcc7942_2093	0.65	-1.7
2,175,717	-	chpY	Synpcc7942_2093	0.66	-1.3
2,175,733	-	chpY	Synpcc7942_2093	0.67	-3.9
2,175,740	+	chpY	Synpcc7942_2093	0.67	-1.5
2,175,740	+	chpY	Synpcc7942_2093	0.67	-0.0
2,175,740	+	chpY	Synpcc7942_2093	0.67	-1.8
2,175,743	-	chpY	Synpcc7942_2093	0.68	-1.5
2,175,748	-	chpY	Synpcc7942_2093	0.68	-1.2
2,175,763	-	chpY	Synpcc7942_2093	0.69	-1.5
2,175,768	-	chpY	Synpcc7942_2093	0.69	-1.7
2,175,768	-	chpY	Synpcc7942_2093	0.69	-0.5
2,175,811	+	chpY	Synpcc7942_2093	0.73	-1.5
2,175,811	-	chpY	Synpcc7942_2093	0.73	-2.5
2,175,820	+	chpY	Synpcc7942_2093	0.73	-4.7