Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1646

Experiment: Thallium(I) acetate 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.00390625 mg/ml
1,713,378	+				+2.1
1,713,466	-	rnc	Synpcc7942_1645	0.18	+1.1
1,713,469	+	rnc	Synpcc7942_1645	0.18	+1.6
1,713,479	+	rnc	Synpcc7942_1645	0.20	-0.9
1,713,516	+	rnc	Synpcc7942_1645	0.25	-1.0
1,713,529	-	rnc	Synpcc7942_1645	0.26	+1.4
1,713,529	-	rnc	Synpcc7942_1645	0.26	+1.1
1,713,545	-	rnc	Synpcc7942_1645	0.29	+3.3
1,713,556	+	rnc	Synpcc7942_1645	0.30	-0.4
1,713,559	+	rnc	Synpcc7942_1645	0.31	+1.1
1,713,567	+	rnc	Synpcc7942_1645	0.32	-0.7
1,713,568	-	rnc	Synpcc7942_1645	0.32	+2.6
1,713,575	-	rnc	Synpcc7942_1645	0.33	-0.8
1,713,585	+	rnc	Synpcc7942_1645	0.34	+0.2
1,713,590	+	rnc	Synpcc7942_1645	0.35	-0.4
1,713,597	+	rnc	Synpcc7942_1645	0.36	-1.4
1,713,643	+	rnc	Synpcc7942_1645	0.42	+0.9
1,713,647	+	rnc	Synpcc7942_1645	0.42	+3.1
1,713,656	-	rnc	Synpcc7942_1645	0.44	+0.1
1,713,670	+	rnc	Synpcc7942_1645	0.45	-1.4
1,713,671	+				+0.3
1,713,679	-	rnc	Synpcc7942_1645	0.47	-0.4
1,713,683	+	rnc	Synpcc7942_1645	0.47	-0.4
1,713,701	+	rnc	Synpcc7942_1645	0.50	-1.0
1,713,744	-	rnc	Synpcc7942_1645	0.55	+0.6
1,713,746	+	rnc	Synpcc7942_1645	0.56	+1.7
1,713,750	+	rnc	Synpcc7942_1645	0.56	-0.1
1,713,750	+	rnc	Synpcc7942_1645	0.56	+0.3
1,713,758	-	rnc	Synpcc7942_1645	0.57	+0.4
1,713,760	+	rnc	Synpcc7942_1645	0.58	+0.8
1,713,760	+	rnc	Synpcc7942_1645	0.58	+0.1
1,713,768	-	rnc	Synpcc7942_1645	0.59	+1.9
1,713,789	-	rnc	Synpcc7942_1645	0.61	-0.4
1,713,789	-	rnc	Synpcc7942_1645	0.61	-1.4
1,713,823	+	rnc	Synpcc7942_1645	0.66	+0.6
1,713,826	-	rnc	Synpcc7942_1645	0.66	+0.1
1,713,834	-	rnc	Synpcc7942_1645	0.67	-0.0
1,713,847	+	rnc	Synpcc7942_1645	0.69	+0.2
1,713,847	+	rnc	Synpcc7942_1645	0.69	+2.0
1,713,847	+	rnc	Synpcc7942_1645	0.69	+1.1
1,713,847	+	rnc	Synpcc7942_1645	0.69	-1.7
1,713,847	+	rnc	Synpcc7942_1645	0.69	+1.1
1,713,847	+	rnc	Synpcc7942_1645	0.69	+1.6
1,713,847	+	rnc	Synpcc7942_1645	0.69	+0.9
1,713,855	-	rnc	Synpcc7942_1645	0.70	+1.7
1,713,855	-	rnc	Synpcc7942_1645	0.70	-1.4
1,713,860	-	rnc	Synpcc7942_1645	0.71	+2.3
1,713,868	-	rnc	Synpcc7942_1645	0.72	-0.4
1,713,868	-	rnc	Synpcc7942_1645	0.72	+1.1
1,713,870	+	rnc	Synpcc7942_1645	0.72	+1.8
1,713,906	+	rnc	Synpcc7942_1645	0.77	-1.4
1,713,914	-	rnc	Synpcc7942_1645	0.78	-0.4
1,713,914	-	rnc	Synpcc7942_1645	0.78	-2.0
1,713,919	+	rnc	Synpcc7942_1645	0.79	+3.1
1,713,933	-	rnc	Synpcc7942_1645	0.81	-0.0
1,714,013	+				-0.4
1,714,047	+				-0.4
1,714,160	-				+1.9
1,714,267	-				+1.9
1,714,277	+				+1.4
1,714,277	+				+1.2
1,714,277	+				+2.9
1,714,284	+				+1.9
1,714,285	-				+1.0
1,714,285	-				+0.6
1,714,285	-				+1.4
1,714,285	-				+0.6
1,714,292	-				-0.3
1,714,296	+				-1.9
1,714,296	+				-0.9
1,714,296	+				+1.6
1,714,296	+				-0.4
1,714,296	+				+0.9
1,714,304	-				+0.8
1,714,324	+				+1.1
1,714,330	-				-1.4
1,714,330	-				-0.4
1,714,375	-				+0.2
1,714,394	-				-0.9
1,714,401	+				-1.2
1,714,409	-				+1.1
1,714,411	+				+0.6
1,714,411	+				+0.0
1,714,527	-		Synpcc7942_1646	0.25	+1.6
1,714,591	+		Synpcc7942_1646	0.34	+0.2
1,714,591	+		Synpcc7942_1646	0.34	+1.1
1,714,591	+		Synpcc7942_1646	0.34	+2.1
1,714,591	+		Synpcc7942_1646	0.34	+1.6
1,714,599	-		Synpcc7942_1646	0.35	+0.6
1,714,599	-		Synpcc7942_1646	0.35	+0.2
1,714,599	-		Synpcc7942_1646	0.35	-0.4
1,714,599	-		Synpcc7942_1646	0.35	-0.1
1,714,712	-		Synpcc7942_1646	0.50	+0.9
1,714,712	-		Synpcc7942_1646	0.50	+0.9
1,714,713	-		Synpcc7942_1646	0.50	-0.4
1,714,740	-		Synpcc7942_1646	0.54	+0.6
1,714,741	+		Synpcc7942_1646	0.54	-1.4
1,714,742	+		Synpcc7942_1646	0.54	-0.4
1,714,742	+		Synpcc7942_1646	0.54	+2.0
1,714,763	+		Synpcc7942_1646	0.57	+0.1
1,714,764	+		Synpcc7942_1646	0.58	-0.9
1,714,769	+		Synpcc7942_1646	0.58	-2.8
1,714,785	-		Synpcc7942_1646	0.60	+1.4
1,714,793	-		Synpcc7942_1646	0.62	+1.0
1,714,793	-		Synpcc7942_1646	0.62	+0.6
1,714,856	+		Synpcc7942_1646	0.70	-1.0
1,714,874	-		Synpcc7942_1646	0.73	+1.6
1,714,874	-		Synpcc7942_1646	0.73	+2.1
1,714,898	+		Synpcc7942_1646	0.76	-0.2
1,715,001	+				+2.5
1,715,009	-				-0.9
1,715,012	-				+1.3
1,715,014	-				-0.4
1,715,066	+				-0.6
1,715,083	-				-1.4
1,715,172	+				+0.9
1,715,172	+				+2.3
1,715,172	+				+0.8
1,715,172	+				-0.4
1,715,180	-				+0.6
1,715,230	+				-2.4
1,715,238	-				-0.4
1,715,282	-				+0.9
1,715,296	-				-0.4
1,715,299	-				+0.6
1,715,320	-				-2.0
1,715,360	-		Synpcc7942_1647	0.10	+1.1
1,715,368	-		Synpcc7942_1647	0.11	+1.6
1,715,368	-		Synpcc7942_1647	0.11	+1.1
1,715,374	+		Synpcc7942_1647	0.12	-1.7
1,715,382	-		Synpcc7942_1647	0.13	+0.5
1,715,382	-		Synpcc7942_1647	0.13	-0.4
1,715,382	-		Synpcc7942_1647	0.13	+0.1
1,715,382	-		Synpcc7942_1647	0.13	-0.6
1,715,382	-		Synpcc7942_1647	0.13	+0.6
1,715,382	-		Synpcc7942_1647	0.13	+1.6
1,715,398	+		Synpcc7942_1647	0.14	-0.4
1,715,403	+		Synpcc7942_1647	0.15	-0.0
1,715,404	-		Synpcc7942_1647	0.15	-0.4
1,715,404	-		Synpcc7942_1647	0.15	-0.0
1,715,457	+		Synpcc7942_1647	0.21	+0.6
1,715,457	+		Synpcc7942_1647	0.21	-0.0
1,715,457	+		Synpcc7942_1647	0.21	+0.1
1,715,465	+		Synpcc7942_1647	0.22	+0.6
1,715,473	-		Synpcc7942_1647	0.22	-2.0
1,715,473	-		Synpcc7942_1647	0.22	+0.4
1,715,499	+		Synpcc7942_1647	0.25	+1.9
1,715,519	-		Synpcc7942_1647	0.27	-0.4
1,715,522	+		Synpcc7942_1647	0.28	-0.1
1,715,530	-		Synpcc7942_1647	0.29	+0.9
1,715,562	+		Synpcc7942_1647	0.32	-0.4
1,715,568	-		Synpcc7942_1647	0.33	-0.7
1,715,594	+		Synpcc7942_1647	0.36	-1.4
1,715,600	+		Synpcc7942_1647	0.36	-0.0
1,715,601	-		Synpcc7942_1647	0.36	-0.4
1,715,605	+		Synpcc7942_1647	0.37	+0.1
1,715,628	-		Synpcc7942_1647	0.39	+0.6
1,715,630	+		Synpcc7942_1647	0.40	-1.4
1,715,630	+		Synpcc7942_1647	0.40	+1.1
1,715,630	+		Synpcc7942_1647	0.40	+0.9
1,715,630	+		Synpcc7942_1647	0.40	+2.4
1,715,630	+		Synpcc7942_1647	0.40	-1.4
1,715,638	-		Synpcc7942_1647	0.40	-1.4
1,715,655	-		Synpcc7942_1647	0.42	+0.4
1,715,694	-		Synpcc7942_1647	0.46	+1.9
1,715,706	+		Synpcc7942_1647	0.48	+1.1
1,715,714	-		Synpcc7942_1647	0.49	-2.0
1,715,741	-		Synpcc7942_1647	0.52	+1.6
1,715,760	-		Synpcc7942_1647	0.54	-0.8
1,715,761	-		Synpcc7942_1647	0.54	+0.6
1,715,761	-		Synpcc7942_1647	0.54	+0.8
1,715,761	-		Synpcc7942_1647	0.54	+0.8
1,715,777	-		Synpcc7942_1647	0.55	-1.1
1,715,781	+		Synpcc7942_1647	0.56	-0.6
1,715,788	+		Synpcc7942_1647	0.57	-0.7
1,715,790	+		Synpcc7942_1647	0.57	-2.0
1,715,798	+		Synpcc7942_1647	0.58	-1.4
1,715,798	+		Synpcc7942_1647	0.58	+1.4
1,715,912	-		Synpcc7942_1647	0.70	+0.8
1,715,958	-				+1.1
1,715,963	+		Synpcc7942_1647	0.76	-1.4
1,715,963	+		Synpcc7942_1647	0.76	+1.1
1,715,963	+		Synpcc7942_1647	0.76	+1.4
1,715,963	+		Synpcc7942_1647	0.76	-1.4
1,715,963	-		Synpcc7942_1647	0.76	-1.0
1,715,971	-		Synpcc7942_1647	0.77	+0.9
1,715,987	-		Synpcc7942_1647	0.78	-0.4
1,715,994	-		Synpcc7942_1647	0.79	-1.4
1,716,020	-		Synpcc7942_1647	0.82	+1.1
1,716,024	+		Synpcc7942_1647	0.82	+0.2
1,716,058	-		Synpcc7942_1647	0.86	+1.6
1,716,065	+		Synpcc7942_1647	0.87	-0.2