Experiment: Thallium(I) acetate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_1101 and Synpcc7942_1102 are separated by 11 nucleotides Synpcc7942_1102 and Synpcc7942_1103 are separated by 64 nucleotides Synpcc7942_1103 and ftsW are separated by 97 nucleotides
Synpcc7942_1101: Synpcc7942_1101 - PDZ/DHR/GLGF, at 1,118,661 to 1,119,818
_1101
Synpcc7942_1102: Synpcc7942_1102 - hypothetical protein, at 1,119,830 to 1,120,258
_1102
Synpcc7942_1103: Synpcc7942_1103 - glucosamine-6-phosphate isomerase 2, at 1,120,323 to 1,121,054
_1103
Synpcc7942_1104: ftsW - cell division protein FtsW, at 1,121,152 to 1,122,417
ftsW
Position (kb)
1120
1121
1122 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1119.339 kb on - strand, within Synpcc7942_1101 at 1119.356 kb on + strand, within Synpcc7942_1101 at 1119.364 kb on - strand, within Synpcc7942_1101 at 1119.364 kb on - strand, within Synpcc7942_1101 at 1119.413 kb on + strand, within Synpcc7942_1101 at 1119.432 kb on - strand, within Synpcc7942_1101 at 1119.437 kb on - strand, within Synpcc7942_1101 at 1119.437 kb on - strand, within Synpcc7942_1101 at 1119.452 kb on - strand, within Synpcc7942_1101 at 1119.495 kb on + strand, within Synpcc7942_1101 at 1119.502 kb on - strand, within Synpcc7942_1101 at 1119.503 kb on - strand, within Synpcc7942_1101 at 1119.512 kb on - strand, within Synpcc7942_1101 at 1119.513 kb on - strand, within Synpcc7942_1101 at 1119.608 kb on - strand, within Synpcc7942_1101 at 1119.625 kb on - strand, within Synpcc7942_1101 at 1119.812 kb on + strand at 1119.815 kb on - strand at 1119.828 kb on + strand at 1119.853 kb on + strand at 1120.144 kb on - strand, within Synpcc7942_1102 at 1120.210 kb on - strand, within Synpcc7942_1102 at 1120.242 kb on - strand at 1120.254 kb on + strand at 1120.282 kb on + strand at 1120.284 kb on + strand at 1120.306 kb on + strand at 1120.314 kb on - strand at 1120.314 kb on - strand at 1120.374 kb on - strand at 1120.374 kb on - strand at 1120.374 kb on - strand at 1120.397 kb on + strand, within Synpcc7942_1103 at 1120.438 kb on - strand, within Synpcc7942_1103 at 1120.439 kb on - strand, within Synpcc7942_1103 at 1120.524 kb on - strand, within Synpcc7942_1103 at 1120.541 kb on - strand, within Synpcc7942_1103 at 1120.580 kb on + strand, within Synpcc7942_1103 at 1120.583 kb on - strand, within Synpcc7942_1103 at 1120.606 kb on - strand, within Synpcc7942_1103 at 1120.621 kb on - strand, within Synpcc7942_1103 at 1120.630 kb on - strand, within Synpcc7942_1103 at 1120.664 kb on + strand, within Synpcc7942_1103 at 1120.671 kb on + strand, within Synpcc7942_1103 at 1120.672 kb on - strand, within Synpcc7942_1103 at 1120.679 kb on - strand, within Synpcc7942_1103 at 1120.703 kb on + strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.711 kb on - strand, within Synpcc7942_1103 at 1120.743 kb on + strand, within Synpcc7942_1103 at 1120.743 kb on + strand, within Synpcc7942_1103 at 1120.748 kb on + strand, within Synpcc7942_1103 at 1120.751 kb on - strand, within Synpcc7942_1103 at 1120.751 kb on - strand, within Synpcc7942_1103 at 1120.751 kb on - strand, within Synpcc7942_1103 at 1120.751 kb on - strand, within Synpcc7942_1103 at 1120.751 kb on - strand, within Synpcc7942_1103 at 1120.753 kb on + strand, within Synpcc7942_1103 at 1120.869 kb on - strand, within Synpcc7942_1103 at 1120.871 kb on + strand, within Synpcc7942_1103 at 1120.873 kb on - strand, within Synpcc7942_1103 at 1120.879 kb on - strand, within Synpcc7942_1103 at 1120.908 kb on + strand at 1120.916 kb on + strand, within Synpcc7942_1103 at 1120.916 kb on + strand, within Synpcc7942_1103 at 1120.921 kb on + strand, within Synpcc7942_1103 at 1120.921 kb on + strand, within Synpcc7942_1103 at 1120.922 kb on + strand, within Synpcc7942_1103 at 1120.929 kb on + strand, within Synpcc7942_1103 at 1120.929 kb on - strand, within Synpcc7942_1103 at 1120.929 kb on - strand, within Synpcc7942_1103 at 1120.939 kb on - strand, within Synpcc7942_1103 at 1120.939 kb on - strand, within Synpcc7942_1103 at 1120.939 kb on - strand at 1120.963 kb on + strand, within Synpcc7942_1103 at 1120.963 kb on - strand, within Synpcc7942_1103 at 1120.972 kb on + strand, within Synpcc7942_1103 at 1121.016 kb on + strand at 1121.047 kb on - strand at 1121.047 kb on - strand at 1121.072 kb on + strand at 1121.107 kb on + strand at 1121.110 kb on - strand at 1121.118 kb on + strand at 1121.118 kb on + strand at 1121.118 kb on - strand at 1121.177 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.00390625 mg/ml remove 1,119,339 - Synpcc7942_1101 0.59 +0.8 1,119,356 + Synpcc7942_1101 0.60 -1.4 1,119,364 - Synpcc7942_1101 0.61 +1.3 1,119,364 - Synpcc7942_1101 0.61 -0.4 1,119,413 + Synpcc7942_1101 0.65 +2.7 1,119,432 - Synpcc7942_1101 0.67 -0.4 1,119,437 - Synpcc7942_1101 0.67 +0.2 1,119,437 - Synpcc7942_1101 0.67 -0.6 1,119,452 - Synpcc7942_1101 0.68 -1.4 1,119,495 + Synpcc7942_1101 0.72 +0.2 1,119,502 - Synpcc7942_1101 0.73 +1.2 1,119,503 - Synpcc7942_1101 0.73 +1.2 1,119,512 - Synpcc7942_1101 0.73 -0.4 1,119,513 - Synpcc7942_1101 0.74 -1.4 1,119,608 - Synpcc7942_1101 0.82 +1.6 1,119,625 - Synpcc7942_1101 0.83 +0.2 1,119,812 + -1.4 1,119,815 - +1.0 1,119,828 + -0.4 1,119,853 + +0.6 1,120,144 - Synpcc7942_1102 0.73 -1.4 1,120,210 - Synpcc7942_1102 0.89 -1.0 1,120,242 - +1.6 1,120,254 + +1.9 1,120,282 + +0.8 1,120,284 + -0.4 1,120,306 + -0.4 1,120,314 - +1.1 1,120,314 - +0.9 1,120,374 - +2.0 1,120,374 - +1.7 1,120,374 - +0.6 1,120,397 + Synpcc7942_1103 0.10 -0.8 1,120,438 - Synpcc7942_1103 0.16 +0.6 1,120,439 - Synpcc7942_1103 0.16 -1.2 1,120,524 - Synpcc7942_1103 0.27 -0.4 1,120,541 - Synpcc7942_1103 0.30 -0.4 1,120,580 + Synpcc7942_1103 0.35 +0.7 1,120,583 - Synpcc7942_1103 0.36 -0.2 1,120,606 - Synpcc7942_1103 0.39 -0.7 1,120,621 - Synpcc7942_1103 0.41 -1.4 1,120,630 - Synpcc7942_1103 0.42 +0.3 1,120,664 + Synpcc7942_1103 0.47 -2.4 1,120,671 + Synpcc7942_1103 0.48 +0.1 1,120,672 - Synpcc7942_1103 0.48 +2.3 1,120,679 - Synpcc7942_1103 0.49 +1.6 1,120,703 + Synpcc7942_1103 0.52 +1.2 1,120,711 - Synpcc7942_1103 0.53 +0.1 1,120,711 - Synpcc7942_1103 0.53 +1.5 1,120,711 - Synpcc7942_1103 0.53 -0.0 1,120,711 - Synpcc7942_1103 0.53 +0.7 1,120,711 - Synpcc7942_1103 0.53 -1.4 1,120,711 - Synpcc7942_1103 0.53 -0.2 1,120,711 - Synpcc7942_1103 0.53 +1.7 1,120,711 - Synpcc7942_1103 0.53 +3.1 1,120,711 - Synpcc7942_1103 0.53 +1.7 1,120,711 - Synpcc7942_1103 0.53 -2.7 1,120,711 - Synpcc7942_1103 0.53 +1.4 1,120,743 + Synpcc7942_1103 0.57 -0.4 1,120,743 + Synpcc7942_1103 0.57 +1.2 1,120,748 + Synpcc7942_1103 0.58 -1.4 1,120,751 - Synpcc7942_1103 0.58 -0.4 1,120,751 - Synpcc7942_1103 0.58 -1.0 1,120,751 - Synpcc7942_1103 0.58 +0.1 1,120,751 - Synpcc7942_1103 0.58 -0.1 1,120,751 - Synpcc7942_1103 0.58 +1.3 1,120,753 + Synpcc7942_1103 0.59 -0.8 1,120,869 - Synpcc7942_1103 0.75 -0.4 1,120,871 + Synpcc7942_1103 0.75 +0.3 1,120,873 - Synpcc7942_1103 0.75 -0.8 1,120,879 - Synpcc7942_1103 0.76 +2.5 1,120,908 + +0.9 1,120,916 + Synpcc7942_1103 0.81 +2.2 1,120,916 + Synpcc7942_1103 0.81 -0.4 1,120,921 + Synpcc7942_1103 0.82 -2.0 1,120,921 + Synpcc7942_1103 0.82 +0.6 1,120,922 + Synpcc7942_1103 0.82 +2.2 1,120,929 + Synpcc7942_1103 0.83 -0.4 1,120,929 - Synpcc7942_1103 0.83 +0.6 1,120,929 - Synpcc7942_1103 0.83 -0.2 1,120,939 - Synpcc7942_1103 0.84 +0.7 1,120,939 - Synpcc7942_1103 0.84 -1.0 1,120,939 - -0.4 1,120,963 + Synpcc7942_1103 0.87 -1.4 1,120,963 - Synpcc7942_1103 0.87 +0.6 1,120,972 + Synpcc7942_1103 0.89 -0.4 1,121,016 + +0.4 1,121,047 - +0.6 1,121,047 - -0.4 1,121,072 + +1.8 1,121,107 + -0.4 1,121,110 - +1.1 1,121,118 + +0.6 1,121,118 + -0.4 1,121,118 - +2.4 1,121,177 - +0.9
Or see this region's nucleotide sequence