Experiment: Thallium(I) acetate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_1080 and Synpcc7942_1081 are separated by 6 nucleotides Synpcc7942_1081 and pacL are separated by 918 nucleotides
Synpcc7942_1080: Synpcc7942_1080 - K+ transporter Trk, at 1,091,781 to 1,093,124
_1080
Synpcc7942_1081: Synpcc7942_1081 - hypothetical protein, at 1,093,131 to 1,093,832
_1081
Synpcc7942_1082: pacL - ATPase, E1-E2 type, at 1,094,751 to 1,097,516
pacL
Position (kb)
1093
1094 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1092.250 kb on - strand, within Synpcc7942_1080 at 1092.274 kb on + strand, within Synpcc7942_1080 at 1092.340 kb on - strand, within Synpcc7942_1080 at 1092.705 kb on - strand, within Synpcc7942_1080 at 1092.707 kb on - strand, within Synpcc7942_1080 at 1092.740 kb on - strand, within Synpcc7942_1080 at 1092.958 kb on + strand, within Synpcc7942_1080 at 1092.958 kb on + strand, within Synpcc7942_1080 at 1093.299 kb on + strand, within Synpcc7942_1081 at 1093.490 kb on - strand, within Synpcc7942_1081 at 1093.592 kb on - strand, within Synpcc7942_1081 at 1093.611 kb on - strand, within Synpcc7942_1081 at 1093.615 kb on + strand, within Synpcc7942_1081 at 1093.760 kb on + strand, within Synpcc7942_1081 at 1093.779 kb on + strand at 1093.856 kb on + strand at 1093.856 kb on + strand at 1093.864 kb on - strand at 1093.885 kb on + strand at 1093.891 kb on - strand at 1093.895 kb on + strand at 1093.895 kb on - strand at 1093.910 kb on - strand at 1093.910 kb on - strand at 1093.936 kb on + strand at 1093.957 kb on - strand at 1094.002 kb on - strand at 1094.111 kb on + strand at 1094.116 kb on - strand at 1094.311 kb on + strand at 1094.499 kb on + strand at 1094.509 kb on + strand at 1094.517 kb on - strand at 1094.531 kb on + strand at 1094.555 kb on + strand at 1094.595 kb on + strand at 1094.647 kb on + strand at 1094.713 kb on - strand at 1094.743 kb on + strand at 1094.749 kb on - strand at 1094.790 kb on + strand at 1094.808 kb on - strand at 1094.826 kb on - strand at 1094.826 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.00390625 mg/ml remove 1,092,250 - Synpcc7942_1080 0.35 -2.4 1,092,274 + Synpcc7942_1080 0.37 +0.9 1,092,340 - Synpcc7942_1080 0.42 -2.7 1,092,705 - Synpcc7942_1080 0.69 +0.9 1,092,707 - Synpcc7942_1080 0.69 -1.4 1,092,740 - Synpcc7942_1080 0.71 -2.5 1,092,958 + Synpcc7942_1080 0.88 -2.4 1,092,958 + Synpcc7942_1080 0.88 -3.9 1,093,299 + Synpcc7942_1081 0.24 -1.7 1,093,490 - Synpcc7942_1081 0.51 -3.2 1,093,592 - Synpcc7942_1081 0.66 -0.4 1,093,611 - Synpcc7942_1081 0.68 -1.0 1,093,615 + Synpcc7942_1081 0.69 +0.0 1,093,760 + Synpcc7942_1081 0.90 +1.9 1,093,779 + -1.7 1,093,856 + +0.6 1,093,856 + +1.5 1,093,864 - +0.3 1,093,885 + -1.4 1,093,891 - +1.3 1,093,895 + +1.4 1,093,895 - +1.0 1,093,910 - +1.3 1,093,910 - -1.9 1,093,936 + +0.6 1,093,957 - +1.4 1,094,002 - -1.4 1,094,111 + +2.5 1,094,116 - -1.4 1,094,311 + -0.2 1,094,499 + +2.2 1,094,509 + -0.2 1,094,517 - +1.3 1,094,531 + -2.0 1,094,555 + +1.4 1,094,595 + -1.0 1,094,647 + -0.4 1,094,713 - -1.4 1,094,743 + +0.2 1,094,749 - -0.2 1,094,790 + +2.0 1,094,808 - -0.3 1,094,826 - +1.5 1,094,826 - +0.5
Or see this region's nucleotide sequence