Experiment: Thallium(I) acetate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0687 and Synpcc7942_0688 overlap by 26 nucleotides Synpcc7942_0688 and Synpcc7942_0689 overlap by 10 nucleotides Synpcc7942_0689 and clpS overlap by 17 nucleotides
Synpcc7942_0687: Synpcc7942_0687 - hypothetical protein, at 682,128 to 683,747
_0687
Synpcc7942_0688: Synpcc7942_0688 - transcriptional regulator, ArsR family, at 683,722 to 684,060
_0688
Synpcc7942_0689: Synpcc7942_0689 - hypothetical protein, at 684,051 to 684,884
_0689
Synpcc7942_0690: clpS - ATP-dependent Clp protease adaptor protein ClpS, at 684,868 to 685,155
clpS
Position (kb) 683
684
685 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11
12
13 at 682.735 kb on + strand, within Synpcc7942_0687 at 682.743 kb on - strand, within Synpcc7942_0687 at 682.743 kb on - strand, within Synpcc7942_0687 at 682.743 kb on - strand, within Synpcc7942_0687 at 682.753 kb on - strand, within Synpcc7942_0687 at 682.754 kb on + strand, within Synpcc7942_0687 at 682.771 kb on + strand, within Synpcc7942_0687 at 682.787 kb on + strand, within Synpcc7942_0687 at 682.789 kb on - strand, within Synpcc7942_0687 at 682.795 kb on - strand, within Synpcc7942_0687 at 682.803 kb on + strand, within Synpcc7942_0687 at 682.825 kb on + strand, within Synpcc7942_0687 at 682.830 kb on + strand, within Synpcc7942_0687 at 682.838 kb on - strand, within Synpcc7942_0687 at 682.916 kb on + strand, within Synpcc7942_0687 at 682.916 kb on + strand, within Synpcc7942_0687 at 682.922 kb on - strand, within Synpcc7942_0687 at 682.924 kb on - strand, within Synpcc7942_0687 at 682.924 kb on - strand, within Synpcc7942_0687 at 682.924 kb on - strand, within Synpcc7942_0687 at 683.097 kb on + strand, within Synpcc7942_0687 at 683.105 kb on + strand, within Synpcc7942_0687 at 683.116 kb on - strand, within Synpcc7942_0687 at 683.116 kb on - strand, within Synpcc7942_0687 at 683.121 kb on - strand, within Synpcc7942_0687 at 683.189 kb on + strand, within Synpcc7942_0687 at 683.236 kb on + strand, within Synpcc7942_0687 at 683.237 kb on + strand, within Synpcc7942_0687 at 683.315 kb on + strand, within Synpcc7942_0687 at 683.426 kb on - strand, within Synpcc7942_0687 at 683.455 kb on + strand, within Synpcc7942_0687 at 683.460 kb on - strand, within Synpcc7942_0687 at 683.473 kb on - strand, within Synpcc7942_0687 at 683.522 kb on + strand, within Synpcc7942_0687 at 683.527 kb on + strand, within Synpcc7942_0687 at 683.535 kb on - strand, within Synpcc7942_0687 at 683.551 kb on + strand, within Synpcc7942_0687 at 683.602 kb on - strand at 683.654 kb on + strand at 683.661 kb on - strand at 683.663 kb on + strand at 683.665 kb on + strand at 683.671 kb on + strand at 683.673 kb on - strand at 683.686 kb on + strand at 683.730 kb on + strand at 683.798 kb on - strand, within Synpcc7942_0688 at 683.827 kb on + strand, within Synpcc7942_0688 at 683.845 kb on - strand, within Synpcc7942_0688 at 683.852 kb on + strand, within Synpcc7942_0688 at 683.886 kb on + strand, within Synpcc7942_0688 at 683.897 kb on + strand, within Synpcc7942_0688 at 683.897 kb on + strand, within Synpcc7942_0688 at 683.897 kb on + strand, within Synpcc7942_0688 at 683.923 kb on - strand, within Synpcc7942_0688 at 683.926 kb on + strand, within Synpcc7942_0688 at 683.940 kb on - strand, within Synpcc7942_0688 at 683.944 kb on + strand, within Synpcc7942_0688 at 683.975 kb on + strand, within Synpcc7942_0688 at 683.983 kb on - strand, within Synpcc7942_0688 at 683.983 kb on - strand, within Synpcc7942_0688 at 683.983 kb on - strand, within Synpcc7942_0688 at 683.983 kb on - strand, within Synpcc7942_0688 at 684.001 kb on - strand, within Synpcc7942_0688 at 684.020 kb on + strand, within Synpcc7942_0688 at 684.024 kb on + strand, within Synpcc7942_0688 at 684.028 kb on - strand at 684.103 kb on - strand at 684.103 kb on - strand at 684.103 kb on - strand at 684.103 kb on - strand at 684.108 kb on - strand at 684.108 kb on - strand at 684.844 kb on + strand at 684.844 kb on + strand at 684.852 kb on - strand at 684.852 kb on - strand at 684.852 kb on - strand at 684.855 kb on - strand at 684.879 kb on + strand at 684.887 kb on - strand at 684.887 kb on - strand at 684.887 kb on - strand at 684.887 kb on - strand at 684.887 kb on - strand at 684.895 kb on - strand at 684.905 kb on - strand, within clpS at 684.954 kb on + strand, within clpS at 684.994 kb on + strand, within clpS at 685.001 kb on + strand, within clpS at 685.020 kb on - strand, within clpS at 685.028 kb on + strand, within clpS at 685.036 kb on - strand, within clpS at 685.041 kb on - strand, within clpS at 685.049 kb on + strand, within clpS
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.00390625 mg/ml remove 682,735 + Synpcc7942_0687 0.37 +11.6 682,743 - Synpcc7942_0687 0.38 +11.0 682,743 - Synpcc7942_0687 0.38 +9.4 682,743 - Synpcc7942_0687 0.38 +11.1 682,753 - Synpcc7942_0687 0.39 +2.2 682,754 + Synpcc7942_0687 0.39 +0.8 682,771 + Synpcc7942_0687 0.40 +9.3 682,787 + Synpcc7942_0687 0.41 +6.3 682,789 - Synpcc7942_0687 0.41 +0.1 682,795 - Synpcc7942_0687 0.41 +2.1 682,803 + Synpcc7942_0687 0.42 -2.5 682,825 + Synpcc7942_0687 0.43 +9.9 682,830 + Synpcc7942_0687 0.43 +8.9 682,838 - Synpcc7942_0687 0.44 +7.4 682,916 + Synpcc7942_0687 0.49 +3.9 682,916 + Synpcc7942_0687 0.49 +10.0 682,922 - Synpcc7942_0687 0.49 +3.6 682,924 - Synpcc7942_0687 0.49 +4.2 682,924 - Synpcc7942_0687 0.49 +2.0 682,924 - Synpcc7942_0687 0.49 +1.5 683,097 + Synpcc7942_0687 0.60 +13.2 683,105 + Synpcc7942_0687 0.60 +4.9 683,116 - Synpcc7942_0687 0.61 +2.8 683,116 - Synpcc7942_0687 0.61 +0.4 683,121 - Synpcc7942_0687 0.61 +9.5 683,189 + Synpcc7942_0687 0.65 -2.0 683,236 + Synpcc7942_0687 0.68 +11.9 683,237 + Synpcc7942_0687 0.68 +6.1 683,315 + Synpcc7942_0687 0.73 +2.9 683,426 - Synpcc7942_0687 0.80 -1.1 683,455 + Synpcc7942_0687 0.82 +5.7 683,460 - Synpcc7942_0687 0.82 +5.2 683,473 - Synpcc7942_0687 0.83 +0.9 683,522 + Synpcc7942_0687 0.86 +4.9 683,527 + Synpcc7942_0687 0.86 +5.2 683,535 - Synpcc7942_0687 0.87 +1.9 683,551 + Synpcc7942_0687 0.88 +6.6 683,602 - -1.8 683,654 + +1.5 683,661 - -1.5 683,663 + +0.9 683,665 + +1.9 683,671 + +0.0 683,673 - -0.5 683,686 + +3.5 683,730 + +8.0 683,798 - Synpcc7942_0688 0.22 +12.3 683,827 + Synpcc7942_0688 0.31 +12.5 683,845 - Synpcc7942_0688 0.36 +10.9 683,852 + Synpcc7942_0688 0.38 +13.0 683,886 + Synpcc7942_0688 0.48 +12.5 683,897 + Synpcc7942_0688 0.52 +10.3 683,897 + Synpcc7942_0688 0.52 +8.6 683,897 + Synpcc7942_0688 0.52 +11.8 683,923 - Synpcc7942_0688 0.59 +12.1 683,926 + Synpcc7942_0688 0.60 +10.2 683,940 - Synpcc7942_0688 0.64 +13.1 683,944 + Synpcc7942_0688 0.65 +13.0 683,975 + Synpcc7942_0688 0.75 +10.3 683,983 - Synpcc7942_0688 0.77 +11.6 683,983 - Synpcc7942_0688 0.77 +11.6 683,983 - Synpcc7942_0688 0.77 +11.8 683,983 - Synpcc7942_0688 0.77 +11.9 684,001 - Synpcc7942_0688 0.82 +11.5 684,020 + Synpcc7942_0688 0.88 +5.6 684,024 + Synpcc7942_0688 0.89 +1.7 684,028 - +11.5 684,103 - +0.8 684,103 - +3.0 684,103 - +0.1 684,103 - +3.6 684,108 - +1.5 684,108 - +1.1 684,844 + +1.2 684,844 + +2.1 684,852 - +1.1 684,852 - +0.9 684,852 - -2.8 684,855 - +0.5 684,879 + +2.4 684,887 - +0.8 684,887 - +0.3 684,887 - +2.4 684,887 - +0.4 684,887 - +2.8 684,895 - +1.4 684,905 - clpS Synpcc7942_0690 0.13 -1.5 684,954 + clpS Synpcc7942_0690 0.30 +0.4 684,994 + clpS Synpcc7942_0690 0.44 -0.8 685,001 + clpS Synpcc7942_0690 0.46 +0.4 685,020 - clpS Synpcc7942_0690 0.53 +2.9 685,028 + clpS Synpcc7942_0690 0.56 +0.6 685,036 - clpS Synpcc7942_0690 0.58 +0.1 685,041 - clpS Synpcc7942_0690 0.60 +2.3 685,049 + clpS Synpcc7942_0690 0.63 -0.5
Or see this region's nucleotide sequence