Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29560

Experiment: L-Phenylalanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (N)
1,988,268	-				+0.7
1,988,268	-				-1.0
1,988,268	-				-0.5
1,988,268	-				-0.3
1,988,276	+				+0.1
1,988,294	-				+0.4
1,988,299	+				-0.6
1,988,300	-				+0.0
1,988,300	-				-0.6
1,988,300	-				-0.2
1,988,305	+				-0.8
1,988,306	-				+0.9
1,988,306	-				-0.5
1,988,309	+				-1.0
1,988,309	+				+1.3
1,988,310	-				+0.4
1,988,310	-				+0.2
1,988,310	-				-0.8
1,988,310	-				+0.6
1,988,310	-				+0.2
1,988,310	-				-0.2
1,988,357	+				-0.6
1,988,362	-				-0.4
1,988,570	+				+0.5
1,988,646	+				+0.6
1,988,653	+				-1.2
1,988,653	+				+0.2
1,988,654	-				-0.3
1,988,660	+				-0.1
1,988,660	+				+0.3
1,988,661	-				-0.2
1,988,661	-				+0.2
1,988,704	+				-0.5
1,988,705	-				-0.9
1,988,716	+				+0.2
1,988,748	+				-0.1
1,988,748	+				-0.4
1,988,749	-				+0.0
1,988,749	-				-0.3
1,988,749	-				+0.9
1,988,749	-				-0.9
1,988,801	+				+0.3
1,988,802	-				-0.7
1,988,802	-				-1.0
1,988,805	+				+0.5
1,988,806	-				+0.7
1,988,862	+				-1.0
1,988,862	+				-0.3
1,988,863	-				+0.2
1,988,868	+				-0.0
1,988,868	+				-0.0
1,988,869	-				-0.8
1,988,869	-				+0.7
1,988,924	-				-0.5
1,988,927	+				+0.7
1,988,927	+				+1.8
1,988,927	+				-0.2
1,988,927	+				-0.2
1,988,928	-				+0.7
1,988,928	-				+1.0
1,988,928	-				-0.5
1,988,967	-				-1.2
1,988,967	-				-0.1
1,988,984	-				+0.6
1,989,014	+				-2.2
1,989,014	+				-2.3
1,989,015	-				-1.6
1,989,056	-				+0.3
1,989,084	-				+0.1
1,989,084	-				-0.8
1,989,084	-				-0.9
1,989,084	-				+1.0
1,989,137	+				+0.4
1,989,138	-				+0.1
1,989,143	+				+0.4
1,989,143	+				-2.6
1,989,206	-				+0.4
1,989,238	+				-0.4
1,989,238	+				+0.2
1,989,239	-				+0.4
1,989,239	-				+0.7
1,989,239	-				-1.3
1,989,239	-				-0.1
1,989,239	-				+0.0
1,989,274	+				-1.1
1,989,274	+				-0.2
1,989,274	+				+0.4
1,989,274	+				+0.4
1,989,274	+				+0.0
1,989,274	+				-0.2
1,989,275	-				-0.4
1,989,275	-				+1.7
1,989,275	-				-0.5
1,989,275	-				+0.0
1,989,275	-				-0.2
1,989,280	+				+1.2
1,989,280	+				-0.1
1,989,280	+				+0.3
1,989,281	-				-0.3
1,989,281	-				+0.1
1,989,327	+		RR42_RS29560	0.13	-0.2
1,989,327	+		RR42_RS29560	0.13	+0.7
1,989,327	+		RR42_RS29560	0.13	-0.1
1,989,327	+		RR42_RS29560	0.13	+0.1
1,989,327	+		RR42_RS29560	0.13	-0.6
1,989,327	+		RR42_RS29560	0.13	+0.7
1,989,328	-		RR42_RS29560	0.13	-0.8
1,989,328	-		RR42_RS29560	0.13	+1.3
1,989,328	-		RR42_RS29560	0.13	+1.6
1,989,362	-		RR42_RS29560	0.17	+0.7
1,989,409	+		RR42_RS29560	0.21	+0.1
1,989,409	+		RR42_RS29560	0.21	-0.4
1,989,409	+		RR42_RS29560	0.21	-1.0
1,989,409	+		RR42_RS29560	0.21	-1.5
1,989,409	+		RR42_RS29560	0.21	-0.7
1,989,409	+		RR42_RS29560	0.21	+0.6
1,989,410	-		RR42_RS29560	0.21	+0.2
1,989,410	-		RR42_RS29560	0.21	+0.1
1,989,410	-		RR42_RS29560	0.21	-0.0
1,989,410	-		RR42_RS29560	0.21	+1.0
1,989,410	-		RR42_RS29560	0.21	-0.2
1,989,410	-		RR42_RS29560	0.21	+1.8
1,989,410	-		RR42_RS29560	0.21	+0.3
1,989,410	-		RR42_RS29560	0.21	+0.9
1,989,451	+		RR42_RS29560	0.25	+0.2
1,989,451	+		RR42_RS29560	0.25	-0.3
1,989,451	+		RR42_RS29560	0.25	+0.3
1,989,452	-		RR42_RS29560	0.25	+0.4
1,989,452	-		RR42_RS29560	0.25	-0.7
1,989,468	+		RR42_RS29560	0.27	+0.4
1,989,478	-		RR42_RS29560	0.28	-0.2
1,989,514	+		RR42_RS29560	0.31	+0.0
1,989,514	+		RR42_RS29560	0.31	-0.3
1,989,514	+		RR42_RS29560	0.31	-1.3
1,989,515	-		RR42_RS29560	0.31	-1.4
1,989,515	-		RR42_RS29560	0.31	+1.3
1,989,515	-		RR42_RS29560	0.31	-0.0
1,989,515	-		RR42_RS29560	0.31	-0.5
1,989,515	-		RR42_RS29560	0.31	+0.4
1,989,534	+		RR42_RS29560	0.33	-2.3
1,989,574	+		RR42_RS29560	0.37	+1.2
1,989,574	+		RR42_RS29560	0.37	+1.8
1,989,575	-		RR42_RS29560	0.37	-0.1
1,989,660	+		RR42_RS29560	0.45	-0.6
1,989,672	+		RR42_RS29560	0.46	+1.7
1,989,760	+		RR42_RS29560	0.54	-0.2
1,989,761	-		RR42_RS29560	0.55	-0.6
1,989,761	-		RR42_RS29560	0.55	+0.4
1,989,761	-		RR42_RS29560	0.55	+0.4
1,989,761	-		RR42_RS29560	0.55	-0.4
1,989,766	+		RR42_RS29560	0.55	+0.1
1,989,767	-		RR42_RS29560	0.55	+0.5
1,989,767	-		RR42_RS29560	0.55	-0.6
1,989,854	+		RR42_RS29560	0.63	-0.1
1,989,854	+		RR42_RS29560	0.63	-0.3
1,989,854	+		RR42_RS29560	0.63	+0.2
1,989,855	-		RR42_RS29560	0.63	+0.0
1,989,855	-		RR42_RS29560	0.63	+0.9
1,989,855	-		RR42_RS29560	0.63	-0.4
1,989,855	-		RR42_RS29560	0.63	-0.2
1,989,856	+		RR42_RS29560	0.64	-1.0
1,989,856	+		RR42_RS29560	0.64	-0.9
1,989,857	-		RR42_RS29560	0.64	-1.6
1,989,857	-		RR42_RS29560	0.64	-1.0
1,989,857	-		RR42_RS29560	0.64	+0.4
1,989,857	-		RR42_RS29560	0.64	+0.0
1,989,857	-		RR42_RS29560	0.64	-0.7
1,989,859	+		RR42_RS29560	0.64	+0.7
1,989,859	+		RR42_RS29560	0.64	-0.8
1,989,859	+		RR42_RS29560	0.64	+0.4
1,989,860	-		RR42_RS29560	0.64	-0.0
1,989,860	-		RR42_RS29560	0.64	+1.4
1,989,860	-		RR42_RS29560	0.64	+0.4
1,989,860	-		RR42_RS29560	0.64	-0.3
1,989,860	-		RR42_RS29560	0.64	-0.7
1,989,860	-		RR42_RS29560	0.64	-0.5
1,989,862	+		RR42_RS29560	0.64	+0.5
1,989,874	+		RR42_RS29560	0.65	+0.1
1,989,875	-		RR42_RS29560	0.65	-0.1
1,989,875	-		RR42_RS29560	0.65	+0.7
1,989,877	+		RR42_RS29560	0.66	-1.0
1,989,878	-		RR42_RS29560	0.66	-0.2
1,989,878	-		RR42_RS29560	0.66	-0.2
1,989,878	-		RR42_RS29560	0.66	-1.9
1,989,878	-		RR42_RS29560	0.66	-0.0
1,989,878	-		RR42_RS29560	0.66	-0.5
1,989,936	+		RR42_RS29560	0.71	-0.0
1,989,937	-		RR42_RS29560	0.71	-0.8
1,989,937	-		RR42_RS29560	0.71	-1.6
1,989,943	+		RR42_RS29560	0.72	+0.5
1,989,944	-		RR42_RS29560	0.72	-0.2
1,989,949	+		RR42_RS29560	0.72	+0.7
1,989,949	+		RR42_RS29560	0.72	+0.4
1,989,949	+		RR42_RS29560	0.72	+0.6
1,989,950	-		RR42_RS29560	0.72	+0.5
1,989,950	-		RR42_RS29560	0.72	+0.2
1,989,950	-		RR42_RS29560	0.72	+0.1
1,989,950	-		RR42_RS29560	0.72	-0.4
1,989,973	+		RR42_RS29560	0.75	+0.7
1,989,974	-		RR42_RS29560	0.75	-1.9
1,989,974	-		RR42_RS29560	0.75	+0.7
1,989,974	-		RR42_RS29560	0.75	+0.1
1,989,991	-		RR42_RS29560	0.76	-0.5
1,989,991	-		RR42_RS29560	0.76	+0.2
1,990,025	+		RR42_RS29560	0.80	-0.1
1,990,026	-		RR42_RS29560	0.80	-0.3
1,990,026	-		RR42_RS29560	0.80	+0.5
1,990,029	-		RR42_RS29560	0.80	-0.2
1,990,043	+		RR42_RS29560	0.81	+0.3
1,990,043	+		RR42_RS29560	0.81	+0.5
1,990,043	+		RR42_RS29560	0.81	+0.6
1,990,056	+		RR42_RS29560	0.83	+0.4
1,990,057	-		RR42_RS29560	0.83	-1.4
1,990,077	-		RR42_RS29560	0.85	-0.7
1,990,077	-		RR42_RS29560	0.85	-0.7
1,990,101	+		RR42_RS29560	0.87	-0.5
1,990,101	+		RR42_RS29560	0.87	+0.2
1,990,101	+		RR42_RS29560	0.87	+0.7
1,990,101	+		RR42_RS29560	0.87	+1.7
1,990,101	+		RR42_RS29560	0.87	-0.2
1,990,101	+		RR42_RS29560	0.87	+0.6
1,990,102	-		RR42_RS29560	0.87	+0.3
1,990,102	-		RR42_RS29560	0.87	+0.4
1,990,102	-		RR42_RS29560	0.87	-0.2
1,990,128	+		RR42_RS29560	0.89	-1.3
1,990,128	+		RR42_RS29560	0.89	-0.2
1,990,129	-		RR42_RS29560	0.89	-0.4
1,990,233	+				+0.1
1,990,238	-				-0.7
1,990,263	+				-0.6
1,990,297	+				+0.9
1,990,329	+				+0.3
1,990,370	-				+1.0
1,990,418	+				-1.5
1,990,561	+				-0.2
1,990,727	-				-0.5
1,990,776	+				-1.0
1,990,786	+				-0.5
1,990,786	+				+0.4
1,990,787	-				+0.1
1,990,790	+				-0.1
1,990,791	-				+0.1
1,990,803	+				-0.1
1,990,851	+				+2.3
1,990,851	+				+0.2
1,990,852	-				-0.5
1,990,898	+				-0.6
1,990,898	+				+0.1
1,990,898	+				-0.8
1,990,898	+				-0.1
1,990,898	+				-1.2
1,990,899	-				+0.3
1,990,899	-				+0.3
1,990,899	-				-1.4
1,990,899	-				+0.5
1,990,899	-				-0.4
1,990,921	+				-0.1
1,990,961	+				+0.4
1,990,961	+				-0.8
1,990,962	-				-0.6
1,990,971	+				+0.5
1,990,972	-				+0.7
1,991,008	+				+0.5
1,991,009	-				-1.6
1,991,009	-				+1.2
1,991,056	+				+0.1
1,991,056	+				-1.3
1,991,057	-				+0.3
1,991,057	-				+0.1
1,991,062	+				-0.4
1,991,062	+				-2.1
1,991,063	-				-0.0
1,991,063	-				+0.5
1,991,087	-				+0.0
1,991,091	+				-0.3
1,991,091	+				+0.6
1,991,092	-				-0.0
1,991,092	-				+0.8
1,991,155	+				+0.4
1,991,156	-				-0.0
1,991,162	+				-0.3
1,991,195	-				-0.2