Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_92

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
95,998	-		Pf1N1B4_91	0.52	-1.5
95,998	-		Pf1N1B4_91	0.52	+2.2
96,151	+		Pf1N1B4_91	0.62	-0.7
96,151	+		Pf1N1B4_91	0.62	-1.5
96,186	+		Pf1N1B4_91	0.64	-0.7
96,187	-		Pf1N1B4_91	0.64	-0.3
96,187	-		Pf1N1B4_91	0.64	-1.9
96,382	-		Pf1N1B4_91	0.77	-0.7
96,510	+		Pf1N1B4_91	0.85	+0.3
96,510	+		Pf1N1B4_91	0.85	+0.8
96,511	-		Pf1N1B4_91	0.86	+1.0
96,624	+				+0.8
96,624	+				-2.2
96,645	+				+0.8
96,645	+				+2.4
96,645	+				-0.7
96,645	+				-1.2
96,645	+				+3.3
96,645	+				+1.8
96,645	+				+1.9
96,645	+				-2.0
96,645	+				-2.2
96,645	+				-0.2
96,646	-				-0.9
96,646	-				+1.6
96,646	-				-1.4
96,646	-				+0.1
96,646	-				-2.1
96,646	-				+1.2
96,646	-				-1.2
96,664	-				+1.1
96,865	+				+0.8
96,866	-				-0.3
96,866	-				-1.0
96,866	-				-0.7
96,866	-				+0.8
96,898	+				+0.0
96,898	+				-2.5
96,899	-				-1.7
97,006	+		Pf1N1B4_92	0.15	+2.7
97,025	-		Pf1N1B4_92	0.17	-0.3
97,178	-		Pf1N1B4_92	0.32	+0.6
97,178	-		Pf1N1B4_92	0.32	-2.3
97,462	+		Pf1N1B4_92	0.61	-0.2
97,559	+		Pf1N1B4_92	0.71	+0.2
97,631	-		Pf1N1B4_92	0.79	-0.6
97,890	+				-2.2
97,891	-				+1.6
98,084	-				-0.7
98,094	+				+1.0
98,095	-				+0.1
98,095	-				+0.4
98,095	-				-1.5
98,095	-				+0.0
98,095	-				-2.0
98,095	-				+1.1
98,192	+		Pf1N1B4_93	0.14	-0.2
98,192	+		Pf1N1B4_93	0.14	+1.4
98,192	+		Pf1N1B4_93	0.14	+0.6
98,193	-		Pf1N1B4_93	0.14	-1.5
98,193	-		Pf1N1B4_93	0.14	+0.5
98,193	-		Pf1N1B4_93	0.14	+0.0