Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5453

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
198,635	+				+1.9
198,636	-				-0.9
198,636	-				+0.9
198,661	+				-2.7
198,709	+				-2.0
198,709	+				-2.0
198,793	+				+0.7
198,793	+				-1.2
198,793	+				-0.3
198,793	+				-0.7
198,793	+				-1.4
198,794	-				-0.9
198,895	-				+1.1
198,981	+				-0.4
198,982	-				-0.7
198,982	-				+0.4
199,101	+				+0.1
199,101	+				+1.6
199,101	+				-0.7
199,130	+				+0.2
199,130	+				+1.9
199,130	+				+0.1
199,148	+				-1.4
199,148	+				+0.8
199,148	+				+0.5
199,149	-				+0.3
199,163	+				+1.4
199,163	+				-0.3
199,187	+				+0.5
199,187	+				+1.7
199,187	+				-0.2
199,189	+				+0.1
199,189	+				-1.2
199,213	+				-0.7
199,239	+				+0.1
199,249	-				+0.9
199,249	-				+0.9
199,354	+				+0.6
199,355	-		Pf1N1B4_5452	0.30	+0.7
199,355	-		Pf1N1B4_5452	0.30	-1.4
199,366	-		Pf1N1B4_5452	0.34	+0.1
199,367	+		Pf1N1B4_5452	0.34	+0.3
199,367	+		Pf1N1B4_5452	0.34	+0.3
199,367	+		Pf1N1B4_5452	0.34	-0.3
199,436	+		Pf1N1B4_5452	0.61	-0.4
199,437	-		Pf1N1B4_5452	0.61	-0.4
199,437	-		Pf1N1B4_5452	0.61	-0.1
199,437	-		Pf1N1B4_5452	0.61	+1.1
199,469	-		Pf1N1B4_5452	0.73	+1.5
199,469	-		Pf1N1B4_5452	0.73	-0.3
199,473	+		Pf1N1B4_5452	0.75	+0.3
199,474	-		Pf1N1B4_5452	0.75	-0.1
199,539	+				-1.7
199,576	-				-0.9
199,670	-		Pf1N1B4_5453	0.31	-3.2
199,830	-		Pf1N1B4_5453	0.79	+1.5
199,830	-		Pf1N1B4_5453	0.79	+0.1
199,830	-		Pf1N1B4_5453	0.79	-0.4
199,840	+		Pf1N1B4_5453	0.82	-0.7
199,841	-		Pf1N1B4_5453	0.82	-1.9
199,841	-		Pf1N1B4_5453	0.82	-1.7
199,841	-		Pf1N1B4_5453	0.82	+0.1
199,844	+		Pf1N1B4_5453	0.83	-0.9
199,845	-		Pf1N1B4_5453	0.84	-1.8
199,888	-				+0.6
199,896	+				+0.3
199,896	+				+0.3
199,896	+				-0.9
199,896	+				-0.2
200,046	-				+0.1
200,249	-				+1.6
200,263	+				+0.2
200,264	-				-0.2
200,264	-				-1.4
200,286	+				+0.5
200,287	-				+0.1
200,287	-				-1.4
200,287	-				+0.4
200,287	-				-2.9
200,287	-				+1.6
200,287	-				-0.3
200,287	-				+1.1
200,287	-				-0.4
200,287	-				-0.0
200,314	+				-1.4
200,314	+				+0.7
200,314	+				-0.9
200,314	+				+0.9
200,314	+				+0.0
200,314	+				+0.1
200,314	+				+0.3
200,315	-				-0.2
200,315	-				+1.5
200,315	-				-0.4
200,315	-				-0.2
200,363	+				-0.4
200,363	+				-0.3
200,363	+				-1.6
200,395	+				-0.4
200,416	+				-0.7
200,416	+				-1.1
200,416	+				+0.1
200,416	+				+0.1
200,416	+				+0.3
200,416	+				-1.2
200,416	+				+0.2
200,442	-				-1.2
200,496	+				-1.7
200,496	+				+1.3
200,496	+				-1.4
200,497	-				+1.1
200,497	-				+0.6
200,604	+				-1.2
200,609	-				+0.4
200,699	+		Pf1N1B4_5454	0.24	-0.9
200,700	-		Pf1N1B4_5454	0.24	-0.3
200,753	+		Pf1N1B4_5454	0.38	-0.9
200,753	+				+0.8
200,753	+		Pf1N1B4_5454	0.38	+0.1
200,754	-		Pf1N1B4_5454	0.38	-0.5
200,754	-		Pf1N1B4_5454	0.38	+2.1
200,754	-		Pf1N1B4_5454	0.38	-0.3
200,769	+		Pf1N1B4_5454	0.42	-0.3
200,770	-		Pf1N1B4_5454	0.42	+1.8
200,770	-		Pf1N1B4_5454	0.42	+0.1
200,824	-		Pf1N1B4_5454	0.56	+0.9
200,824	-		Pf1N1B4_5454	0.56	-0.1