Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5433

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
171,291	-		Pf1N1B4_5432	0.69	+0.1
171,291	-		Pf1N1B4_5432	0.69	-1.6
171,365	-				-1.4
171,416	+				+0.6
171,417	-				-0.9
171,417	-				+0.9
171,417	-				+1.1
171,417	-				+1.1
171,417	-				+0.1
171,561	-				+1.4
171,585	-				+0.7
171,667	-				-0.3
171,705	+				+0.3
171,729	+				-2.8
171,729	+				+0.7
171,729	+				-3.2
171,729	+				-1.2
171,730	-				+2.1
171,730	-				+1.0
171,730	-				-0.7
171,730	-				-0.1
171,733	+				+2.1
171,733	+				-0.7
171,733	+				+0.7
171,734	-				+1.0
171,756	-				+1.0
171,761	+				+1.9
171,762	-				+0.9
171,762	-				-3.0
171,849	-				+0.3
171,855	+				-1.7
171,887	-				+0.4
171,892	+				-0.4
171,954	+				-1.0
171,954	+				+0.5
171,965	+				-3.0
171,966	-				+0.1
172,073	-				+1.5
172,108	+				-0.0
172,243	+				+0.9
172,243	+				+0.7
172,243	+				+0.9
172,244	-				-0.7
172,255	+				-2.2
172,255	+				+0.1
172,316	+		Pf1N1B4_5433	0.11	+1.5
172,494	+		Pf1N1B4_5433	0.42	+0.3
172,495	-				+0.1
172,515	+		Pf1N1B4_5433	0.45	+0.1
172,515	+		Pf1N1B4_5433	0.45	+0.8
172,753	+		Pf1N1B4_5433	0.87	+1.1
172,753	+		Pf1N1B4_5433	0.87	+1.3
172,890	+				+0.9
173,004	-				+0.1
173,004	-				+0.8
173,110	+				+1.1
173,196	+				+2.8
173,196	+				-1.2
173,196	+				+0.6
173,274	+				-1.4
173,274	+				+0.5
173,274	+				-0.9
173,274	+				+0.7
173,274	+				+0.0
173,274	+				+1.3
173,274	+				-2.0
173,274	+				-1.7
173,274	+				-0.1
173,274	+				+1.1
173,274	+				+1.1
173,274	+				+0.7
173,275	-				+2.1
173,275	-				-0.7
173,275	-				+1.1
173,276	+				+0.9
173,276	+				+1.6
173,276	+				+0.3
173,277	-				-1.2
173,285	+				-2.2
173,285	+				-0.1
173,286	-				+0.7
173,389	-				+1.8
173,584	-				+1.6
173,584	-				-0.5
173,617	-				+1.5
173,617	-				-0.9
173,664	+				+0.1
173,665	-				+0.1
173,665	-				-0.4
173,665	-				-0.2
173,686	-				+1.1
173,699	-				-0.3
173,716	+				+0.1
173,716	+				-0.1
173,716	+				+1.1
173,716	+				+0.6
173,717	-				-1.7
173,717	-				-1.2
173,717	-				+0.3
173,717	-				+1.1
173,717	-				+0.7
173,784	+				+0.3
173,784	+				-0.0