Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5275

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
29,594	+				+0.5
29,594	+				-1.5
29,595	-				+0.4
29,595	-				-0.5
29,595	-				+0.4
29,595	-				+0.7
29,595	-				-0.9
29,656	+				-0.2
29,656	+				-1.0
29,708	+		Pf1N1B4_5274	0.15	+0.1
29,709	-		Pf1N1B4_5274	0.15	+1.7
29,709	-		Pf1N1B4_5274	0.15	+0.9
29,780	+		Pf1N1B4_5274	0.40	-0.9
29,780	+		Pf1N1B4_5274	0.40	+1.1
29,780	+		Pf1N1B4_5274	0.40	+0.4
29,780	+		Pf1N1B4_5274	0.40	+0.5
29,781	-		Pf1N1B4_5274	0.41	-1.5
29,781	-		Pf1N1B4_5274	0.41	-1.9
29,872	+		Pf1N1B4_5274	0.73	-0.1
29,872	+		Pf1N1B4_5274	0.73	-2.0
29,912	+		Pf1N1B4_5274	0.87	+0.4
29,912	+		Pf1N1B4_5274	0.87	+1.3
29,924	+				-1.3
29,924	+				+0.2
29,924	+				+0.8
29,924	+				-1.2
29,924	+				+0.5
29,924	+				+0.5
29,924	+				+1.9
29,924	+				-1.9
29,924	+				+0.8
29,925	-				-0.5
29,925	-				+0.5
29,925	-				-1.0
29,945	+				-0.1
29,945	+				-2.0
29,946	-				+0.1
29,946	-				-0.5
29,985	+				+0.8
29,985	+				-1.0
29,985	+				+1.4
30,143	+				-0.2
30,143	+				+1.5
30,143	+				+1.1
30,143	+				-1.0
30,144	-				-2.2
30,144	-				+0.5
30,144	-				-0.2
30,144	-				-0.5
30,144	-				+0.2
30,144	-				-0.9
30,212	-				+2.7
30,212	-				+0.1
30,278	+				+0.1
30,297	+				+0.5
30,383	+				-1.0
30,384	-				+0.1
30,384	-				+0.9
30,564	+		Pf1N1B4_5275	0.54	+0.5
30,565	-		Pf1N1B4_5275	0.55	-1.3
30,565	-		Pf1N1B4_5275	0.55	-0.7
30,600	+		Pf1N1B4_5275	0.64	+0.1
30,600	+				+1.5
30,600	+		Pf1N1B4_5275	0.64	-0.7
30,723	+				-0.2
30,724	-				+0.5
30,780	+				-1.1
30,805	+				-1.7
30,904	+				+0.4
30,919	+				+0.5
30,919	+				+1.1
30,945	+				+1.8
31,092	+				-0.9
31,095	+				-1.3
31,095	+				-0.5
31,095	+				+0.1
31,095	+				-2.0
31,096	-				+0.4
31,096	-				-0.1
31,096	-				-1.7
31,174	-				-0.9
31,263	+				-0.7
31,264	-				+1.5
31,301	-				-1.0
31,360	+				-1.0
31,361	-				+0.2
31,459	+				+1.3
31,459	+				+0.0
31,459	+				+0.1
31,459	+				+0.5
31,460	-				+0.5
31,475	+				+0.8
31,567	-				-1.5
31,637	-				+0.5
31,663	+				+2.1
31,663	+				+1.7
31,663	+				-1.0