Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4897

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
5,418,510	+		Pf1N1B4_4896	0.29	-1.8
5,418,539	-		Pf1N1B4_4896	0.32	+0.4
5,418,558	+		Pf1N1B4_4896	0.33	+1.5
5,418,608	+		Pf1N1B4_4896	0.38	-2.0
5,418,681	+		Pf1N1B4_4896	0.45	-1.3
5,418,682	-		Pf1N1B4_4896	0.46	-2.0
5,418,727	+		Pf1N1B4_4896	0.50	+1.3
5,418,728	-		Pf1N1B4_4896	0.50	-0.0
5,418,728	-		Pf1N1B4_4896	0.50	-0.1
5,418,738	-		Pf1N1B4_4896	0.51	+2.4
5,418,984	+				+1.5
5,419,016	-		Pf1N1B4_4896	0.78	+0.8
5,419,096	+		Pf1N1B4_4896	0.86	+0.2
5,419,096	+		Pf1N1B4_4896	0.86	-1.8
5,419,096	+		Pf1N1B4_4896	0.86	+0.9
5,419,097	-		Pf1N1B4_4896	0.86	+0.5
5,419,097	-		Pf1N1B4_4896	0.86	-0.2
5,419,097	-				-0.5
5,419,179	-				+1.5
5,419,179	-				+0.7
5,419,179	-				+1.5
5,419,189	+				-1.0
5,419,190	-				+0.1
5,419,192	+				+0.1
5,419,287	+				-1.0
5,419,288	-				+1.5
5,419,301	+				+1.5
5,419,329	+				-0.9
5,419,330	-				+0.5
5,419,330	-				+0.0
5,419,354	+				+1.4
5,419,361	-				+1.5
5,419,441	+				-2.0
5,419,600	-		Pf1N1B4_4897	0.15	-0.7
5,419,600	-				-0.0
5,419,762	-				+0.5
5,420,145	-				-2.0
5,420,145	-		Pf1N1B4_4897	0.77	-0.3
5,420,240	+				+1.9
5,420,241	-		Pf1N1B4_4897	0.88	-0.9
5,420,241	-		Pf1N1B4_4897	0.88	-2.8
5,420,321	+				+0.3
5,420,321	+				-1.5
5,420,322	-				-0.0
5,420,495	+				+0.5
5,420,496	-		Pf1N1B4_4898	0.43	-1.8
5,420,496	-		Pf1N1B4_4898	0.43	+0.9
5,420,496	-		Pf1N1B4_4898	0.43	+0.3
5,420,496	-		Pf1N1B4_4898	0.43	-2.6
5,420,562	-				+0.3
5,420,562	-				-0.1
5,420,562	-				+2.0
5,420,610	-				-1.0
5,420,610	-				-0.5
5,420,610	-				+1.5
5,420,610	-				-1.8
5,420,610	-				+0.1
5,420,614	-				-1.8
5,420,615	+				-0.7
5,420,665	-				-1.5
5,420,694	-				+1.5
5,420,911	-				-1.3
5,421,019	+				-1.0
5,421,021	+				+1.9
5,421,299	+				-2.6
5,421,329	+				+1.3