Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4839
Experiment: Rifampicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,345,122 | - | -0.4 | |||
| 5,345,186 | + | Pf1N1B4_4838 | 0.70 | -0.9 | |
| 5,345,335 | + | Pf1N1B4_4838 | 0.77 | -0.6 | |
| 5,345,589 | - | Pf1N1B4_4838 | 0.89 | +0.1 | |
| 5,345,917 | - | -0.7 | |||
| 5,346,297 | - | Pf1N1B4_4839 | 0.57 | -2.2 | |
| 5,346,332 | - | Pf1N1B4_4839 | 0.61 | -2.2 | |
| 5,346,485 | + | Pf1N1B4_4839 | 0.81 | +0.9 | |
| 5,346,486 | - | -0.0 | |||
| 5,346,544 | - | Pf1N1B4_4839 | 0.88 | -2.4 | |
| 5,346,812 | - | -1.2 | |||
| 5,346,852 | - | -0.4 | |||
| 5,347,080 | - | +0.6 | |||
| 5,347,080 | - | +0.6 | |||
| 5,347,101 | + | -2.0 | |||
| 5,347,264 | + | -1.0 | |||
| 5,347,264 | + | -2.0 | |||
| 5,347,290 | + | -1.2 | |||
| 5,347,291 | - | -0.8 | |||
| 5,347,291 | - | +0.2 | |||
| 5,347,474 | - | +0.6 |
Or see this region's nucleotide sequence