Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4735

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
5,231,698	+		Pf1N1B4_4733	0.74	+0.8
5,231,698	+		Pf1N1B4_4733	0.74	-1.4
5,232,145	+				-1.0
5,232,145	+		Pf1N1B4_4734	0.33	+1.1
5,232,146	-		Pf1N1B4_4734	0.33	-0.8
5,232,213	+		Pf1N1B4_4734	0.43	+1.1
5,232,214	-		Pf1N1B4_4734	0.43	+1.6
5,232,397	+		Pf1N1B4_4734	0.70	-2.0
5,232,411	+				-1.4
5,232,476	+		Pf1N1B4_4734	0.81	+0.6
5,232,487	-		Pf1N1B4_4734	0.83	-0.1
5,232,505	+		Pf1N1B4_4734	0.86	-2.0
5,232,505	+		Pf1N1B4_4734	0.86	+0.6
5,232,572	-				-0.8
5,232,572	-				+1.1
5,232,831	+		Pf1N1B4_4735	0.13	-0.4
5,232,831	+				+0.6
5,232,831	+		Pf1N1B4_4735	0.13	+1.1
5,232,832	-		Pf1N1B4_4735	0.13	+1.1
5,232,832	-		Pf1N1B4_4735	0.13	+1.1
5,232,832	-		Pf1N1B4_4735	0.13	-0.3
5,232,867	+				+0.6
5,232,868	-		Pf1N1B4_4735	0.16	-0.2
5,232,904	+		Pf1N1B4_4735	0.19	-0.6
5,232,953	-		Pf1N1B4_4735	0.22	+0.6
5,233,035	-		Pf1N1B4_4735	0.29	+1.7
5,233,035	-		Pf1N1B4_4735	0.29	-2.2
5,233,349	-		Pf1N1B4_4735	0.53	+1.3
5,233,815	+		Pf1N1B4_4735	0.89	-2.6
5,233,847	-				+1.4
5,233,889	+				-1.8
5,233,890	-				+0.8
5,233,968	-				-0.1
5,233,971	+				-0.2
5,233,971	+				+1.6
5,233,971	+				-0.4
5,233,982	-				-0.4
5,233,994	+				-1.8
5,234,021	+				+0.5
5,234,218	+		Pf1N1B4_4736	0.37	-1.0
5,234,219	-		Pf1N1B4_4736	0.37	+1.0
5,234,224	+		Pf1N1B4_4736	0.38	-0.9
5,234,224	+		Pf1N1B4_4736	0.38	-0.4
5,234,225	-		Pf1N1B4_4736	0.38	-0.8
5,234,228	+		Pf1N1B4_4736	0.39	+0.2
5,234,735	+				+0.6