Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4722
Experiment: Rifampicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,217,261 | - | Pf1N1B4_4720 | 0.89 | +0.8 | |
5,217,294 | - | -0.5 | |||
5,217,306 | - | +1.2 | |||
5,217,576 | - | -1.4 | |||
5,217,576 | - | Pf1N1B4_4721 | 0.31 | -0.6 | |
5,217,576 | - | Pf1N1B4_4721 | 0.31 | -0.7 | |
5,217,703 | + | Pf1N1B4_4721 | 0.52 | +0.7 | |
5,218,132 | + | +1.0 | |||
5,218,169 | + | -1.0 | |||
5,218,224 | + | Pf1N1B4_4722 | 0.26 | +0.3 | |
5,218,489 | - | Pf1N1B4_4722 | 0.80 | +1.2 | |
5,218,698 | + | +0.5 | |||
5,218,751 | + | +2.4 | |||
5,218,751 | + | +0.1 | |||
5,218,783 | + | -0.2 | |||
5,218,809 | - | -0.2 | |||
5,218,868 | - | +1.1 | |||
5,219,164 | + | Pf1N1B4_4723 | 0.22 | +1.7 | |
5,219,165 | - | -0.4 | |||
5,219,233 | + | Pf1N1B4_4723 | 0.26 | -0.4 | |
5,219,348 | - | +0.6 |
Or see this region's nucleotide sequence