Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4643

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
5,118,126	+				+1.1
5,118,126	+				-0.1
5,118,126	+				+0.5
5,118,126	+				-0.9
5,118,126	+				+2.4
5,118,126	+				-0.8
5,118,126	+				-1.4
5,118,126	+				+0.6
5,118,126	+				+1.0
5,118,126	+				+1.4
5,118,127	-				+0.0
5,118,127	-				+0.8
5,118,130	+				-0.8
5,118,620	+				+1.0
5,119,093	-				-0.1
5,119,093	-				-1.9
5,119,216	+				+0.6
5,119,332	+				-3.6
5,119,726	+		Pf1N1B4_4643	0.15	-1.4
5,119,726	+		Pf1N1B4_4643	0.15	-1.8
5,119,816	+		Pf1N1B4_4643	0.17	-0.9
5,119,816	+		Pf1N1B4_4643	0.17	-1.9
5,119,817	-		Pf1N1B4_4643	0.17	-0.0
5,119,895	-		Pf1N1B4_4643	0.19	-1.4
5,119,899	-		Pf1N1B4_4643	0.19	-0.9
5,119,960	+		Pf1N1B4_4643	0.20	-1.4
5,119,961	-				+1.1
5,120,002	+		Pf1N1B4_4643	0.21	-2.1
5,120,003	-		Pf1N1B4_4643	0.21	-0.9
5,120,225	-		Pf1N1B4_4643	0.26	-0.3
5,120,254	+				+0.6
5,120,254	+		Pf1N1B4_4643	0.26	-2.2
5,120,255	-				+0.1
5,120,635	+		Pf1N1B4_4643	0.34	-0.9
5,120,687	-		Pf1N1B4_4643	0.35	-1.7
5,121,028	+		Pf1N1B4_4643	0.42	+1.1
5,121,367	+		Pf1N1B4_4643	0.49	-2.0
5,121,477	-		Pf1N1B4_4643	0.51	-1.0
5,121,826	-		Pf1N1B4_4643	0.58	-1.0
5,121,866	+		Pf1N1B4_4643	0.59	-1.8
5,121,866	+		Pf1N1B4_4643	0.59	-2.4
5,121,867	-		Pf1N1B4_4643	0.59	-1.0
5,121,867	-		Pf1N1B4_4643	0.59	-0.6
5,122,102	+				-0.4
5,122,285	+		Pf1N1B4_4643	0.68	-2.6
5,122,285	+		Pf1N1B4_4643	0.68	+0.6
5,122,285	+		Pf1N1B4_4643	0.68	-1.4
5,122,286	-		Pf1N1B4_4643	0.68	-2.4
5,122,286	-		Pf1N1B4_4643	0.68	-1.0
5,122,286	-		Pf1N1B4_4643	0.68	-1.4
5,122,286	-				-1.0
5,122,563	+		Pf1N1B4_4643	0.73	-0.7
5,122,621	+		Pf1N1B4_4643	0.74	-2.2
5,122,621	+		Pf1N1B4_4643	0.74	+3.1
5,122,622	-		Pf1N1B4_4643	0.74	-2.4
5,122,622	-		Pf1N1B4_4643	0.74	+1.6
5,122,622	-		Pf1N1B4_4643	0.74	-1.0
5,122,822	+		Pf1N1B4_4643	0.79	+0.6
5,123,077	+		Pf1N1B4_4643	0.84	+0.3
5,123,078	-		Pf1N1B4_4643	0.84	-1.0
5,123,078	-		Pf1N1B4_4643	0.84	-1.0
5,123,078	-		Pf1N1B4_4643	0.84	-0.2
5,123,356	+		Pf1N1B4_4643	0.89	-0.9
5,123,356	+		Pf1N1B4_4643	0.89	-0.9
5,123,356	+		Pf1N1B4_4643	0.89	-1.4
5,123,356	+		Pf1N1B4_4643	0.89	-1.0
5,123,356	+		Pf1N1B4_4643	0.89	-1.8
5,123,356	+		Pf1N1B4_4643	0.89	-1.0
5,123,416	+				-2.8
5,123,416	+				-2.4
5,123,416	+				-1.4
5,123,417	-				-2.2
5,123,485	+				-0.1
5,123,485	+				-1.6
5,123,767	+				-2.4
5,123,767	+				+0.3
5,123,767	+				+0.6
5,124,077	+				-0.4
5,124,078	-				+0.1
5,124,210	+				+0.1
5,124,211	-				-0.0
5,124,217	-				+0.3
5,124,232	-				+0.3
5,124,247	-				+0.6
5,124,285	+				-1.0
5,124,285	+		Pf1N1B4_4644	0.15	+0.4
5,124,286	-		Pf1N1B4_4644	0.16	-0.9
5,124,286	-				+0.6
5,124,286	-		Pf1N1B4_4644	0.16	-0.7
5,124,286	-				-0.4
5,124,286	-		Pf1N1B4_4644	0.16	-0.8
5,124,286	-		Pf1N1B4_4644	0.16	+1.3
5,124,286	-				-0.0
5,124,286	-		Pf1N1B4_4644	0.16	-2.0
5,124,286	-		Pf1N1B4_4644	0.16	+0.4
5,124,286	-				+1.1
5,124,545	+				-0.4
5,124,545	+				+0.6
5,124,546	-				+1.4
5,124,611	+				+1.6
5,124,611	+				+2.0