Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4482

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,942,668	-				-1.4
4,942,753	+				+1.6
4,942,753	+				+1.4
4,942,753	+				-0.4
4,942,779	-				+0.6
4,942,779	-				-1.4
4,942,851	-				+0.2
4,942,904	-				-1.4
4,943,226	+		Pf1N1B4_4481	0.60	+0.6
4,943,251	-		Pf1N1B4_4481	0.65	+0.6
4,943,251	-				+1.2
4,943,370	+		Pf1N1B4_4481	0.90	-2.0
4,943,370	+		Pf1N1B4_4481	0.90	+1.8
4,943,370	+		Pf1N1B4_4481	0.90	-1.0
4,943,372	+				+0.4
4,943,372	+				-0.4
4,943,372	+				+1.0
4,943,372	+				+0.8
4,943,550	+				+0.6
4,943,550	+				+0.3
4,943,578	-				+1.1
4,943,809	-		Pf1N1B4_4482	0.30	+1.4
4,943,809	-		Pf1N1B4_4482	0.30	-0.2
4,943,809	-		Pf1N1B4_4482	0.30	-1.7
4,943,809	-		Pf1N1B4_4482	0.30	-0.1
4,943,958	+		Pf1N1B4_4482	0.47	+0.9
4,943,959	-		Pf1N1B4_4482	0.47	+0.6
4,943,959	-		Pf1N1B4_4482	0.47	+0.9
4,943,959	-		Pf1N1B4_4482	0.47	+1.1
4,943,978	-		Pf1N1B4_4482	0.50	+0.9
4,944,303	+		Pf1N1B4_4482	0.87	+1.3
4,944,351	+				+0.0
4,944,352	-				-0.7
4,944,360	+				+2.5
4,944,360	+				+2.5
4,944,360	+				+0.6
4,944,360	+				+2.0
4,944,361	-				-1.4
4,944,366	+				+2.1
4,944,367	-				+0.9
4,944,367	-				+0.4
4,944,465	+				+1.4
4,944,465	+				-0.7
4,944,466	-				-2.5
4,944,735	-		Pf1N1B4_4483	0.65	+0.2
4,944,757	+		Pf1N1B4_4483	0.71	+1.8
4,944,757	+		Pf1N1B4_4483	0.71	+1.0
4,944,757	+		Pf1N1B4_4483	0.71	+0.9
4,944,758	-		Pf1N1B4_4483	0.72	+0.9
4,944,758	-				-1.4
4,944,758	-		Pf1N1B4_4483	0.72	-1.6
4,944,761	+		Pf1N1B4_4483	0.73	+0.2
4,944,761	+		Pf1N1B4_4483	0.73	+1.0
4,944,761	+		Pf1N1B4_4483	0.73	-1.7
4,944,761	+		Pf1N1B4_4483	0.73	+0.9
4,944,761	+		Pf1N1B4_4483	0.73	-0.1
4,944,761	+		Pf1N1B4_4483	0.73	-2.2
4,944,761	+		Pf1N1B4_4483	0.73	-0.7
4,944,762	-		Pf1N1B4_4483	0.73	-0.6
4,944,766	+		Pf1N1B4_4483	0.74	-0.1
4,944,766	+		Pf1N1B4_4483	0.74	+1.8
4,944,767	-		Pf1N1B4_4483	0.74	-0.4
4,944,820	+				+0.6
4,944,821	-				-0.6
4,944,977	+				+2.0
4,945,021	-				+0.1
4,945,083	-				-1.0
4,945,085	+				-0.2
4,945,086	-				+0.0
4,945,180	+		Pf1N1B4_4484	0.12	-0.3
4,945,180	+		Pf1N1B4_4484	0.12	-2.4
4,945,180	+		Pf1N1B4_4484	0.12	+1.0
4,945,184	-		Pf1N1B4_4484	0.12	-0.1
4,945,220	-		Pf1N1B4_4484	0.15	-0.8
4,945,220	-		Pf1N1B4_4484	0.15	+1.6