Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4449

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,907,215	-		Pf1N1B4_4447	0.60	-0.5
4,907,446	-				+1.0
4,907,447	+				-1.2
4,907,447	+				+0.0
4,907,448	-				+0.6
4,907,448	-				-2.6
4,907,448	-				-1.0
4,907,491	+				-1.4
4,907,491	+				+0.6
4,907,491	+				+0.1
4,907,491	+				-1.0
4,907,491	+				-2.5
4,907,492	-				-0.4
4,907,492	-				+0.6
4,907,496	+				+0.1
4,907,497	-				+0.5
4,907,635	+		Pf1N1B4_4448	0.38	-0.2
4,907,635	+		Pf1N1B4_4448	0.38	+0.4
4,907,636	-				-1.7
4,907,636	-		Pf1N1B4_4448	0.38	-1.4
4,907,701	+				-0.4
4,907,719	+		Pf1N1B4_4448	0.61	+1.9
4,907,719	+		Pf1N1B4_4448	0.61	+0.6
4,907,770	+		Pf1N1B4_4448	0.75	-0.7
4,907,863	-				-0.6
4,908,143	-				-1.4
4,908,407	-				+0.0
4,908,475	+		Pf1N1B4_4449	0.28	+0.6
4,908,838	+		Pf1N1B4_4449	0.50	-0.1
4,908,839	-		Pf1N1B4_4449	0.50	-1.7
4,908,839	-		Pf1N1B4_4449	0.50	+2.4
4,908,839	-		Pf1N1B4_4449	0.50	-0.4
4,909,097	-		Pf1N1B4_4449	0.66	-1.0
4,909,207	+		Pf1N1B4_4449	0.73	+1.4
4,909,207	+				+1.2
4,909,208	-		Pf1N1B4_4449	0.73	-0.8
4,909,304	-		Pf1N1B4_4449	0.79	+1.0
4,909,369	+		Pf1N1B4_4449	0.83	+0.6
4,909,528	+				+0.8
4,909,729	-				+0.6
4,909,729	-				-0.6
4,909,740	+				+1.3
4,909,740	+				-1.0
4,909,740	+				-1.7
4,909,741	-				+0.4
4,909,741	-				+0.6
4,909,754	+				+1.0
4,909,755	-				-1.4
4,909,830	+				-0.2
4,909,830	+				+0.2
4,909,830	+				+0.9
4,909,936	+				-0.6
4,909,937	-				+1.1
4,910,140	-		Pf1N1B4_4450	0.19	-1.4
4,910,213	+		Pf1N1B4_4450	0.23	-0.7
4,910,241	+		Pf1N1B4_4450	0.25	-0.3
4,910,241	+		Pf1N1B4_4450	0.25	-2.0
4,910,242	-		Pf1N1B4_4450	0.25	+1.3
4,910,242	-				-2.0
4,910,397	+		Pf1N1B4_4450	0.34	+0.1
4,910,488	-		Pf1N1B4_4450	0.40	-1.7
4,910,493	+		Pf1N1B4_4450	0.40	-2.2