Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4250

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,711,551	+		Pf1N1B4_4249	0.31	+1.1
4,711,551	+		Pf1N1B4_4249	0.31	-2.3
4,711,650	+		Pf1N1B4_4249	0.43	-1.5
4,711,650	+		Pf1N1B4_4249	0.43	-0.9
4,711,650	+		Pf1N1B4_4249	0.43	-0.9
4,711,650	+		Pf1N1B4_4249	0.43	+1.2
4,711,653	+		Pf1N1B4_4249	0.44	+0.3
4,711,653	+		Pf1N1B4_4249	0.44	+0.0
4,711,653	+		Pf1N1B4_4249	0.44	+0.3
4,711,662	+				+2.1
4,711,663	-		Pf1N1B4_4249	0.45	-1.4
4,711,663	-		Pf1N1B4_4249	0.45	+1.4
4,711,985	+		Pf1N1B4_4249	0.87	-2.2
4,711,985	+		Pf1N1B4_4249	0.87	+1.3
4,712,036	+				+0.5
4,712,036	+				-0.3
4,712,036	+				-0.6
4,712,037	-				-1.3
4,712,037	-				+1.1
4,712,123	+				-0.2
4,712,123	+				-1.7
4,712,123	+				+1.1
4,712,123	+				-1.1
4,712,150	-				-1.9
4,712,370	-		Pf1N1B4_4250	0.17	-2.2
4,712,370	-		Pf1N1B4_4250	0.17	+0.1
4,712,370	-		Pf1N1B4_4250	0.17	-1.3
4,712,684	-		Pf1N1B4_4250	0.52	-2.3
4,712,875	+		Pf1N1B4_4250	0.73	-0.3
4,713,190	-				-0.1
4,713,306	+				+0.7
4,713,307	-				+0.7
4,713,307	-				-0.0
4,713,339	+				+1.7
4,713,401	-				+1.7
4,713,401	-				+0.7
4,713,403	-				+0.1
4,713,448	-				+0.1
4,713,448	-				-1.9
4,713,463	+				-0.3
4,713,483	+		Pf1N1B4_4251	0.11	-0.3
4,713,483	+		Pf1N1B4_4251	0.11	-2.0
4,713,484	-		Pf1N1B4_4251	0.11	+0.0
4,713,484	-		Pf1N1B4_4251	0.11	+0.7
4,713,498	+		Pf1N1B4_4251	0.11	+0.5
4,713,499	-				-0.3
4,713,499	-		Pf1N1B4_4251	0.12	-1.2
4,713,499	-		Pf1N1B4_4251	0.12	-1.3
4,713,594	+		Pf1N1B4_4251	0.16	+0.2
4,713,594	+		Pf1N1B4_4251	0.16	+2.1
4,713,594	+		Pf1N1B4_4251	0.16	+0.3
4,713,595	-		Pf1N1B4_4251	0.16	+0.1
4,713,631	-		Pf1N1B4_4251	0.17	-1.4
4,713,631	-		Pf1N1B4_4251	0.17	+1.1
4,713,705	+				+1.1
4,713,706	-		Pf1N1B4_4251	0.20	-2.3
4,713,706	-		Pf1N1B4_4251	0.20	-0.1
4,713,708	+		Pf1N1B4_4251	0.20	+0.9
4,713,790	-		Pf1N1B4_4251	0.24	-0.4
4,713,834	+		Pf1N1B4_4251	0.26	-1.7
4,713,835	-		Pf1N1B4_4251	0.26	+0.7
4,713,930	+		Pf1N1B4_4251	0.30	+1.4
4,713,948	+		Pf1N1B4_4251	0.30	+0.2
4,713,948	+		Pf1N1B4_4251	0.30	-0.8
4,713,949	-		Pf1N1B4_4251	0.31	+0.5
4,713,949	-		Pf1N1B4_4251	0.31	-0.9