Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4154

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,598,129	-		Pf1N1B4_4153	0.43	-1.1
4,598,129	-				+0.7
4,598,418	+		Pf1N1B4_4153	0.80	+1.3
4,598,430	+		Pf1N1B4_4153	0.82	-0.8
4,598,430	+		Pf1N1B4_4153	0.82	+0.2
4,598,430	+		Pf1N1B4_4153	0.82	+0.3
4,598,430	+		Pf1N1B4_4153	0.82	-0.3
4,598,430	+		Pf1N1B4_4153	0.82	+0.9
4,598,431	-		Pf1N1B4_4153	0.82	-0.3
4,598,431	-				+1.3
4,598,432	+		Pf1N1B4_4153	0.82	+1.2
4,598,433	-		Pf1N1B4_4153	0.82	-0.7
4,598,433	-		Pf1N1B4_4153	0.82	-0.3
4,598,433	-		Pf1N1B4_4153	0.82	-1.3
4,598,526	-				-1.7
4,598,526	-				-0.7
4,598,593	+				+0.7
4,598,593	+				-0.3
4,598,647	-				-2.8
4,598,679	+				-0.3
4,598,864	+				-2.1
4,599,230	+		Pf1N1B4_4154	0.18	-2.5
4,599,427	-		Pf1N1B4_4154	0.46	-1.9
4,599,444	-		Pf1N1B4_4154	0.49	-0.9
4,599,492	-		Pf1N1B4_4154	0.56	-0.9
4,599,492	-		Pf1N1B4_4154	0.56	-2.3
4,599,584	+		Pf1N1B4_4154	0.69	-0.7
4,599,584	+		Pf1N1B4_4154	0.69	+1.7
4,599,635	+		Pf1N1B4_4154	0.76	+0.1
4,599,636	-		Pf1N1B4_4154	0.76	-0.9
4,599,723	-		Pf1N1B4_4154	0.89	-1.3
4,599,750	+				-2.5
4,600,085	+		Pf1N1B4_4155	0.14	-0.9
4,600,401	+		Pf1N1B4_4155	0.57	+0.4
4,600,401	+		Pf1N1B4_4155	0.57	+0.4
4,600,741	-				-1.0