Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4065

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,519,287	+				+0.6
4,519,296	+				-0.3
4,519,296	+				+0.2
4,519,296	+				+1.1
4,519,297	-				-1.1
4,519,333	+				-3.1
4,519,333	+				-0.1
4,519,408	+				+0.7
4,519,408	+				+0.7
4,519,741	-		Pf1N1B4_4065	0.32	+1.1
4,519,834	+		Pf1N1B4_4065	0.39	-0.4
4,519,834	+		Pf1N1B4_4065	0.39	+1.5
4,519,834	+				+2.3
4,519,834	+		Pf1N1B4_4065	0.39	+1.1
4,519,834	+		Pf1N1B4_4065	0.39	+0.6
4,519,834	+		Pf1N1B4_4065	0.39	+1.7
4,519,834	+		Pf1N1B4_4065	0.39	+0.7
4,519,835	-		Pf1N1B4_4065	0.39	-1.9
4,519,835	-		Pf1N1B4_4065	0.39	+1.3
4,519,835	-		Pf1N1B4_4065	0.39	-0.2
4,519,835	-		Pf1N1B4_4065	0.39	-0.5
4,519,835	-		Pf1N1B4_4065	0.39	-3.3
4,520,028	+		Pf1N1B4_4065	0.53	+0.0
4,520,028	+		Pf1N1B4_4065	0.53	+0.4
4,520,028	+		Pf1N1B4_4065	0.53	-0.6
4,520,028	+		Pf1N1B4_4065	0.53	-3.0
4,520,028	+		Pf1N1B4_4065	0.53	+0.4
4,520,028	+		Pf1N1B4_4065	0.53	+1.1
4,520,029	-		Pf1N1B4_4065	0.53	-0.5
4,520,029	-		Pf1N1B4_4065	0.53	+0.7
4,520,088	+		Pf1N1B4_4065	0.57	+0.7
4,520,088	+		Pf1N1B4_4065	0.57	-1.6
4,520,088	+		Pf1N1B4_4065	0.57	+0.2
4,520,088	+		Pf1N1B4_4065	0.57	+0.8
4,520,088	+		Pf1N1B4_4065	0.57	-3.0
4,520,204	+		Pf1N1B4_4065	0.66	-0.1
4,520,205	-		Pf1N1B4_4065	0.66	-1.9
4,520,304	+		Pf1N1B4_4065	0.73	-1.3
4,520,433	+		Pf1N1B4_4065	0.82	+0.7
4,520,433	+		Pf1N1B4_4065	0.82	+0.2
4,520,433	+		Pf1N1B4_4065	0.82	+0.5
4,520,433	+		Pf1N1B4_4065	0.82	-0.6
4,520,433	+		Pf1N1B4_4065	0.82	+0.7
4,520,433	+		Pf1N1B4_4065	0.82	-1.6
4,520,434	-		Pf1N1B4_4065	0.82	+1.1
4,520,596	+				-2.3
4,520,596	+				-0.1
4,520,596	+				-0.3
4,520,596	+				+1.5
4,520,596	+				+0.6
4,520,596	+				+0.7
4,520,596	+				+1.3
4,520,596	+				+1.6
4,520,597	-				+1.0
4,520,597	-				+1.4
4,520,597	-				-0.3
4,520,727	-				-0.5
4,520,949	-		Pf1N1B4_4066	0.12	+0.3
4,520,949	-		Pf1N1B4_4066	0.12	+0.1
4,520,951	+		Pf1N1B4_4066	0.13	-1.9
4,520,952	-		Pf1N1B4_4066	0.13	+0.7
4,520,952	-		Pf1N1B4_4066	0.13	-0.3
4,520,952	-		Pf1N1B4_4066	0.13	-0.1
4,520,952	-		Pf1N1B4_4066	0.13	+1.4
4,521,006	-		Pf1N1B4_4066	0.18	+0.7
4,521,006	-		Pf1N1B4_4066	0.18	-1.3
4,521,080	+		Pf1N1B4_4066	0.25	-1.3
4,521,080	+		Pf1N1B4_4066	0.25	-0.5
4,521,080	+		Pf1N1B4_4066	0.25	-0.6
4,521,081	-		Pf1N1B4_4066	0.26	+0.0
4,521,200	-				-1.3
4,521,221	+		Pf1N1B4_4066	0.40	-0.3
4,521,222	-		Pf1N1B4_4066	0.40	-0.6
4,521,222	-		Pf1N1B4_4066	0.40	-2.3
4,521,479	+		Pf1N1B4_4066	0.65	-0.0
4,521,662	+				-1.9
4,521,663	-		Pf1N1B4_4066	0.83	-1.2