Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4024

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,475,143	+				+0.0
4,475,153	+				-0.9
4,475,153	+				-1.8
4,475,153	+				+0.7
4,475,153	+				-0.3
4,475,153	+				+0.1
4,475,154	-				+0.7
4,475,234	+				+0.7
4,475,235	-				+0.3
4,475,235	-				+1.2
4,475,340	-		Pf1N1B4_4023	0.32	-1.9
4,475,361	+		Pf1N1B4_4023	0.38	-0.2
4,475,480	+		Pf1N1B4_4023	0.74	+1.0
4,475,493	+		Pf1N1B4_4023	0.77	-0.5
4,475,493	+		Pf1N1B4_4023	0.77	+1.7
4,475,493	+		Pf1N1B4_4023	0.77	+1.7
4,475,493	+		Pf1N1B4_4023	0.77	-1.3
4,475,516	+		Pf1N1B4_4023	0.84	+0.1
4,475,516	+		Pf1N1B4_4023	0.84	-2.1
4,475,516	+		Pf1N1B4_4023	0.84	-0.5
4,475,530	-		Pf1N1B4_4023	0.89	-1.1
4,475,530	-		Pf1N1B4_4023	0.89	-0.7
4,475,693	+				-0.4
4,475,704	+				+2.3
4,475,704	+				-0.3
4,475,705	-				+0.1
4,475,741	+				+0.9
4,475,741	+				+1.2
4,475,742	-				-1.1
4,475,875	+				-0.0
4,475,875	+				-0.9
4,475,875	+				-1.0
4,475,875	+				-1.6
4,475,875	+				-1.1
4,475,875	+				+1.4
4,475,876	-				+1.3
4,475,876	-				-1.9
4,475,876	-				+0.7
4,475,876	-				-0.1
4,475,901	-				-1.3
4,475,978	-				-0.3
4,475,978	-				-1.3
4,476,024	+				+1.4
4,476,165	+		Pf1N1B4_4024	0.31	-1.8
4,476,166	-		Pf1N1B4_4024	0.32	-1.3
4,476,168	+		Pf1N1B4_4024	0.32	-1.9
4,476,168	+		Pf1N1B4_4024	0.32	+0.1
4,476,168	+		Pf1N1B4_4024	0.32	-2.3
4,476,169	-		Pf1N1B4_4024	0.33	-1.0
4,476,169	-				+0.7
4,476,423	+				-3.1
4,476,423	+				-1.9
4,476,423	+				-1.1
4,476,424	-				+0.3
4,476,543	+				-1.6
4,476,544	-				-0.3
4,476,584	-				+0.3
4,476,584	-				-0.3
4,476,606	-				-0.2
4,476,653	-				+0.1
4,476,669	+				-2.1
4,476,763	+				+1.3
4,476,764	-		Pf1N1B4_4025	0.17	-0.4
4,476,764	-		Pf1N1B4_4025	0.17	-1.3
4,476,764	-		Pf1N1B4_4025	0.17	-1.1
4,476,764	-		Pf1N1B4_4025	0.17	-0.9
4,476,764	-		Pf1N1B4_4025	0.17	+0.5
4,476,764	-		Pf1N1B4_4025	0.17	-0.2
4,476,835	+		Pf1N1B4_4025	0.27	-0.9
4,476,835	+		Pf1N1B4_4025	0.27	-0.6
4,476,835	+				+2.5
4,476,836	-		Pf1N1B4_4025	0.27	-0.9
4,476,836	-		Pf1N1B4_4025	0.27	-1.7
4,476,836	-		Pf1N1B4_4025	0.27	-0.6
4,476,836	-		Pf1N1B4_4025	0.27	-0.1
4,476,836	-				+0.1
4,476,836	-		Pf1N1B4_4025	0.27	+0.7
4,476,836	-		Pf1N1B4_4025	0.27	-0.7
4,476,836	-		Pf1N1B4_4025	0.27	-0.8
4,476,836	-		Pf1N1B4_4025	0.27	-0.7
4,476,836	-		Pf1N1B4_4025	0.27	-1.0
4,476,836	-		Pf1N1B4_4025	0.27	-0.5
4,476,836	-		Pf1N1B4_4025	0.27	-1.3
4,476,857	-		Pf1N1B4_4025	0.29	+1.1
4,476,913	+		Pf1N1B4_4025	0.37	+2.0
4,476,913	+		Pf1N1B4_4025	0.37	-0.0
4,476,913	+		Pf1N1B4_4025	0.37	-0.5
4,476,914	-		Pf1N1B4_4025	0.37	+1.2
4,476,979	+		Pf1N1B4_4025	0.45	+0.2
4,476,980	-		Pf1N1B4_4025	0.46	-0.3
4,477,162	+		Pf1N1B4_4025	0.69	+0.4
4,477,163	-		Pf1N1B4_4025	0.70	+0.2
4,477,163	-		Pf1N1B4_4025	0.70	-0.9
4,477,163	-		Pf1N1B4_4025	0.70	+0.2
4,477,163	-		Pf1N1B4_4025	0.70	+0.6
4,477,163	-		Pf1N1B4_4025	0.70	-2.6
4,477,163	-		Pf1N1B4_4025	0.70	-1.9
4,477,163	-		Pf1N1B4_4025	0.70	-0.0
4,477,163	-		Pf1N1B4_4025	0.70	-0.4
4,477,163	-		Pf1N1B4_4025	0.70	+1.4
4,477,163	-		Pf1N1B4_4025	0.70	-0.0
4,477,163	-		Pf1N1B4_4025	0.70	+1.8
4,477,166	-		Pf1N1B4_4025	0.70	+0.2
4,477,166	-		Pf1N1B4_4025	0.70	+0.5
4,477,166	-		Pf1N1B4_4025	0.70	-1.5
4,477,166	-		Pf1N1B4_4025	0.70	-1.9
4,477,228	+		Pf1N1B4_4025	0.78	+0.8
4,477,228	+		Pf1N1B4_4025	0.78	-1.5
4,477,229	-		Pf1N1B4_4025	0.78	+0.4
4,477,229	-		Pf1N1B4_4025	0.78	+0.3
4,477,229	-		Pf1N1B4_4025	0.78	+0.7
4,477,232	-		Pf1N1B4_4025	0.79	-2.1
4,477,232	-		Pf1N1B4_4025	0.79	-0.1
4,477,232	-		Pf1N1B4_4025	0.79	-2.0
4,477,265	-		Pf1N1B4_4025	0.83	-0.6
4,477,298	-		Pf1N1B4_4025	0.87	+2.0
4,477,345	+				+0.1
4,477,346	-				+0.3