Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3829

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
4,242,754	+		Pf1N1B4_3827	0.87	-0.4
4,242,898	+				+2.4
4,242,898	+				-0.2
4,242,899	-				-3.0
4,242,899	-				-2.7
4,242,932	+				-0.8
4,242,937	+				+0.8
4,242,938	-				-2.4
4,242,938	-				-0.8
4,242,938	-				-0.2
4,242,938	-				-0.4
4,242,947	+				-1.2
4,243,017	+				-0.8
4,243,018	-				-0.7
4,243,018	-				-1.4
4,243,018	-				-1.3
4,243,046	+				-1.2
4,243,070	+				+0.8
4,243,070	+				+1.8
4,243,070	+				-0.8
4,243,071	-				-1.0
4,243,071	-				-1.0
4,243,097	+				-0.7
4,243,195	+		Pf1N1B4_3828	0.27	+2.4
4,243,195	+				+0.8
4,243,218	+				+0.8
4,243,218	+		Pf1N1B4_3828	0.32	-0.9
4,243,237	+		Pf1N1B4_3828	0.36	-1.0
4,243,341	-		Pf1N1B4_3828	0.57	-1.0
4,243,341	-		Pf1N1B4_3828	0.57	-2.2
4,243,341	-		Pf1N1B4_3828	0.57	-2.7
4,243,341	-		Pf1N1B4_3828	0.57	-1.1
4,243,341	-		Pf1N1B4_3828	0.57	-2.4
4,243,341	-		Pf1N1B4_3828	0.57	-0.9
4,243,341	-		Pf1N1B4_3828	0.57	-1.2
4,243,341	-		Pf1N1B4_3828	0.57	-2.0
4,243,341	-		Pf1N1B4_3828	0.57	-0.5
4,243,341	-		Pf1N1B4_3828	0.57	-3.6
4,243,341	-		Pf1N1B4_3828	0.57	-2.0
4,243,341	-				-0.2
4,243,341	-		Pf1N1B4_3828	0.57	-1.0
4,243,341	-		Pf1N1B4_3828	0.57	-2.2
4,243,448	-		Pf1N1B4_3828	0.79	-1.1
4,243,448	-		Pf1N1B4_3828	0.79	-1.0
4,243,490	+				+0.5
4,243,490	+		Pf1N1B4_3828	0.87	+0.5
4,243,491	-				-0.2
4,243,491	-		Pf1N1B4_3828	0.87	-2.2
4,243,491	-		Pf1N1B4_3828	0.87	-1.8
4,243,491	-		Pf1N1B4_3828	0.87	+0.4
4,243,491	-		Pf1N1B4_3828	0.87	-2.0
4,243,491	-		Pf1N1B4_3828	0.87	-3.1
4,243,491	-		Pf1N1B4_3828	0.87	-1.5
4,243,491	-		Pf1N1B4_3828	0.87	-0.8
4,243,491	-		Pf1N1B4_3828	0.87	-0.2
4,243,491	-		Pf1N1B4_3828	0.87	-3.6
4,243,491	-		Pf1N1B4_3828	0.87	-2.0
4,243,491	-		Pf1N1B4_3828	0.87	+0.2
4,243,497	-		Pf1N1B4_3828	0.89	-3.2
4,243,551	-				-2.0
4,243,566	-				-2.0
4,243,634	+				-1.1
4,243,751	+		Pf1N1B4_3829	0.17	+1.6
4,243,751	+		Pf1N1B4_3829	0.17	+0.8
4,243,751	+		Pf1N1B4_3829	0.17	+0.4
4,243,755	+		Pf1N1B4_3829	0.18	-0.5
4,243,755	+		Pf1N1B4_3829	0.18	-0.7
4,243,755	+		Pf1N1B4_3829	0.18	-0.8
4,243,755	+		Pf1N1B4_3829	0.18	+0.2
4,243,755	+		Pf1N1B4_3829	0.18	+1.1
4,243,755	+		Pf1N1B4_3829	0.18	+0.6
4,243,756	-		Pf1N1B4_3829	0.18	-1.0
4,243,756	-		Pf1N1B4_3829	0.18	-0.8
4,243,775	+		Pf1N1B4_3829	0.20	-0.9
4,243,775	+		Pf1N1B4_3829	0.20	-0.0
4,243,775	+		Pf1N1B4_3829	0.20	-1.0
4,243,775	+		Pf1N1B4_3829	0.20	+0.4
4,243,775	+		Pf1N1B4_3829	0.20	-2.9
4,243,776	-		Pf1N1B4_3829	0.20	-1.5
4,243,776	-		Pf1N1B4_3829	0.20	-2.0
4,243,776	-		Pf1N1B4_3829	0.20	-2.0
4,244,028	+		Pf1N1B4_3829	0.45	-1.2
4,244,028	+		Pf1N1B4_3829	0.45	+1.3
4,244,028	+		Pf1N1B4_3829	0.45	+0.2
4,244,028	+		Pf1N1B4_3829	0.45	+0.1
4,244,028	+		Pf1N1B4_3829	0.45	-0.7
4,244,028	+		Pf1N1B4_3829	0.45	+0.8
4,244,028	+		Pf1N1B4_3829	0.45	+0.0
4,244,028	+		Pf1N1B4_3829	0.45	+0.1
4,244,028	+		Pf1N1B4_3829	0.45	+0.1
4,244,028	+		Pf1N1B4_3829	0.45	-2.0
4,244,028	+		Pf1N1B4_3829	0.45	-0.5
4,244,029	-		Pf1N1B4_3829	0.45	-2.8
4,244,029	-		Pf1N1B4_3829	0.45	-1.1
4,244,029	-		Pf1N1B4_3829	0.45	-1.1
4,244,029	-		Pf1N1B4_3829	0.45	-1.5
4,244,029	-		Pf1N1B4_3829	0.45	-3.9
4,244,029	-		Pf1N1B4_3829	0.45	-0.1
4,244,029	-		Pf1N1B4_3829	0.45	-1.8
4,244,029	-		Pf1N1B4_3829	0.45	-3.2
4,244,029	-		Pf1N1B4_3829	0.45	-0.6
4,244,029	-		Pf1N1B4_3829	0.45	-2.4
4,244,029	-		Pf1N1B4_3829	0.45	-2.2
4,244,029	-		Pf1N1B4_3829	0.45	-3.3
4,244,029	-		Pf1N1B4_3829	0.45	-1.4
4,244,029	-		Pf1N1B4_3829	0.45	-2.8
4,244,029	-		Pf1N1B4_3829	0.45	-2.3
4,244,030	+		Pf1N1B4_3829	0.45	-1.8
4,244,030	+		Pf1N1B4_3829	0.45	-0.9
4,244,030	+		Pf1N1B4_3829	0.45	-0.9
4,244,031	-		Pf1N1B4_3829	0.45	-2.4
4,244,031	-		Pf1N1B4_3829	0.45	-1.2
4,244,031	-		Pf1N1B4_3829	0.45	-2.8
4,244,031	-		Pf1N1B4_3829	0.45	-1.2
4,244,031	-		Pf1N1B4_3829	0.45	-2.7
4,244,031	-		Pf1N1B4_3829	0.45	-1.2
4,244,040	+		Pf1N1B4_3829	0.46	-1.0
4,244,040	+		Pf1N1B4_3829	0.46	-0.2
4,244,040	+		Pf1N1B4_3829	0.46	+1.8
4,244,041	-				-1.8
4,244,041	-		Pf1N1B4_3829	0.46	-1.2
4,244,041	-		Pf1N1B4_3829	0.46	-1.0
4,244,041	-		Pf1N1B4_3829	0.46	-1.9
4,244,049	-		Pf1N1B4_3829	0.47	-2.7
4,244,129	+		Pf1N1B4_3829	0.55	+1.4
4,244,129	+		Pf1N1B4_3829	0.55	+0.0
4,244,129	+		Pf1N1B4_3829	0.55	-0.2
4,244,130	-		Pf1N1B4_3829	0.55	-1.8
4,244,130	-		Pf1N1B4_3829	0.55	-2.7
4,244,130	-		Pf1N1B4_3829	0.55	-2.8
4,244,130	-		Pf1N1B4_3829	0.55	-1.0
4,244,130	-		Pf1N1B4_3829	0.55	-2.9
4,244,130	-		Pf1N1B4_3829	0.55	-1.7
4,244,130	-				-0.5
4,244,130	-		Pf1N1B4_3829	0.55	-0.8
4,244,130	-		Pf1N1B4_3829	0.55	-0.8
4,244,130	-		Pf1N1B4_3829	0.55	-2.2
4,244,207	+		Pf1N1B4_3829	0.63	-0.8
4,244,208	-		Pf1N1B4_3829	0.63	-4.1
4,244,230	+				-0.2
4,244,230	+		Pf1N1B4_3829	0.65	-1.8
4,244,231	-		Pf1N1B4_3829	0.66	-0.7
4,244,231	-		Pf1N1B4_3829	0.66	-0.8
4,244,231	-		Pf1N1B4_3829	0.66	-1.3
4,244,231	-		Pf1N1B4_3829	0.66	-2.2
4,244,231	-		Pf1N1B4_3829	0.66	-2.0
4,244,237	-		Pf1N1B4_3829	0.66	-1.5
4,244,392	-		Pf1N1B4_3829	0.82	-1.5
4,244,392	-		Pf1N1B4_3829	0.82	-3.2
4,244,392	-		Pf1N1B4_3829	0.82	-3.7
4,244,392	-		Pf1N1B4_3829	0.82	-3.4
4,244,469	-		Pf1N1B4_3829	0.89	-0.2
4,244,549	-				-0.8
4,244,549	-				-3.9
4,244,620	+				-0.2
4,244,620	+				-0.4
4,244,620	+				-0.1
4,244,621	-				-4.6
4,244,621	-				-0.2
4,244,621	-				-2.9
4,244,621	-				-3.1
4,244,621	-				-0.8
4,244,621	-				-1.4
4,244,621	-				-2.2
4,244,636	+				-2.7
4,244,636	+				-3.0
4,244,636	+				-2.5
4,244,636	+				-1.7
4,244,636	+				-1.8
4,244,637	-				-0.9
4,244,637	-				-2.2
4,244,825	+		Pf1N1B4_3830	0.76	-1.8
4,244,825	+		Pf1N1B4_3830	0.76	-3.1
4,244,849	+		Pf1N1B4_3830	0.85	-1.5
4,244,850	-		Pf1N1B4_3830	0.86	-3.0
4,244,850	-		Pf1N1B4_3830	0.86	+0.8
4,244,850	-		Pf1N1B4_3830	0.86	-1.8
4,244,855	+		Pf1N1B4_3830	0.88	+0.5
4,244,855	+		Pf1N1B4_3830	0.88	-3.5
4,244,873	+				-1.8
4,244,873	+				-0.2
4,244,874	-				-1.8
4,245,124	+		Pf1N1B4_3831	0.29	-2.2
4,245,143	-		Pf1N1B4_3831	0.31	-3.2
4,245,171	+		Pf1N1B4_3831	0.34	-0.6
4,245,171	+		Pf1N1B4_3831	0.34	-1.4
4,245,171	+		Pf1N1B4_3831	0.34	-0.8
4,245,172	-		Pf1N1B4_3831	0.34	-1.5
4,245,242	+		Pf1N1B4_3831	0.43	-2.2
4,245,242	+		Pf1N1B4_3831	0.43	-2.8
4,245,242	+		Pf1N1B4_3831	0.43	-2.0
4,245,242	+		Pf1N1B4_3831	0.43	-3.7
4,245,242	+		Pf1N1B4_3831	0.43	-0.8
4,245,243	-		Pf1N1B4_3831	0.43	-0.6
4,245,256	-		Pf1N1B4_3831	0.45	-0.8
4,245,400	+		Pf1N1B4_3831	0.62	-0.6
4,245,400	+		Pf1N1B4_3831	0.62	-0.6
4,245,400	+		Pf1N1B4_3831	0.62	-0.4
4,245,400	+		Pf1N1B4_3831	0.62	-0.6
4,245,401	-		Pf1N1B4_3831	0.62	-1.8
4,245,548	+		Pf1N1B4_3831	0.80	-1.0
4,245,548	+		Pf1N1B4_3831	0.80	-0.2
4,245,548	+		Pf1N1B4_3831	0.80	-1.7
4,245,548	+		Pf1N1B4_3831	0.80	-0.8
4,245,548	+		Pf1N1B4_3831	0.80	-0.9
4,245,548	+		Pf1N1B4_3831	0.80	+0.1
4,245,548	+		Pf1N1B4_3831	0.80	-0.4
4,245,548	+		Pf1N1B4_3831	0.80	-1.2
4,245,548	+				-1.2
4,245,549	-		Pf1N1B4_3831	0.80	-0.8
4,245,549	-		Pf1N1B4_3831	0.80	-4.0
4,245,563	+		Pf1N1B4_3831	0.82	-0.5
4,245,563	+				-0.8
4,245,563	+		Pf1N1B4_3831	0.82	-0.9
4,245,563	+		Pf1N1B4_3831	0.82	-0.8
4,245,564	-		Pf1N1B4_3831	0.82	-1.5
4,245,564	-				-0.2