Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3468

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,873,624	+				-1.4
3,873,625	-		Pf1N1B4_3466	0.51	-1.2
3,873,654	+		Pf1N1B4_3466	0.55	+0.2
3,873,716	+		Pf1N1B4_3466	0.63	-0.1
3,873,837	+		Pf1N1B4_3466	0.80	+0.6
3,873,838	-		Pf1N1B4_3466	0.80	-0.5
3,873,934	+				-0.0
3,874,011	+				+0.2
3,874,011	+				+0.3
3,874,011	+				-1.0
3,874,011	+				-0.0
3,874,011	+				-1.9
3,874,011	+				+1.2
3,874,011	+				-1.0
3,874,011	+				-0.4
3,874,011	+				+0.4
3,874,011	+				+0.3
3,874,011	+				+0.5
3,874,011	+				-1.4
3,874,011	+				-1.5
3,874,011	+				+0.5
3,874,011	+				+0.6
3,874,011	+				-1.9
3,874,011	+				-0.9
3,874,011	+				-1.6
3,874,011	+				+1.0
3,874,011	+				-0.0
3,874,011	+				-0.4
3,874,012	-				-0.0
3,874,012	-				+2.0
3,874,012	-				+0.3
3,874,135	+		Pf1N1B4_3467	0.12	+2.0
3,874,135	+		Pf1N1B4_3467	0.12	+1.3
3,874,135	+		Pf1N1B4_3467	0.12	+0.5
3,874,135	+		Pf1N1B4_3467	0.12	+0.5
3,874,136	-		Pf1N1B4_3467	0.13	-1.2
3,874,136	-		Pf1N1B4_3467	0.13	-1.0
3,874,220	+		Pf1N1B4_3467	0.31	-0.6
3,874,527	+				-1.4
3,874,527	+				+0.8
3,874,532	+				+0.4
3,874,532	+				+0.1
3,874,533	-				-0.6
3,874,649	-		Pf1N1B4_3468	0.17	-1.6
3,874,650	+		Pf1N1B4_3468	0.18	-0.0
3,874,650	+		Pf1N1B4_3468	0.18	-1.6
3,874,861	+		Pf1N1B4_3468	0.82	-1.5
3,874,936	+				-0.0
3,874,991	-				-1.4
3,875,089	+				+1.0
3,875,089	+				+0.4
3,875,089	+				+0.7
3,875,089	+				-1.0
3,875,090	-				+1.0
3,875,090	-				-1.9
3,875,297	+		Pf1N1B4_3469	0.30	-1.0
3,875,297	+		Pf1N1B4_3469	0.30	-0.6
3,875,297	+		Pf1N1B4_3469	0.30	-2.0
3,875,297	+		Pf1N1B4_3469	0.30	+2.2
3,875,298	-		Pf1N1B4_3469	0.30	+1.7
3,875,298	-		Pf1N1B4_3469	0.30	+0.6
3,875,407	-		Pf1N1B4_3469	0.46	-0.0
3,875,478	+		Pf1N1B4_3469	0.56	+1.0
3,875,478	+		Pf1N1B4_3469	0.56	+1.0
3,875,478	+		Pf1N1B4_3469	0.56	-0.2
3,875,478	+		Pf1N1B4_3469	0.56	-0.0
3,875,479	-		Pf1N1B4_3469	0.56	+0.7
3,875,479	-		Pf1N1B4_3469	0.56	-2.5
3,875,490	+		Pf1N1B4_3469	0.58	+0.3
3,875,597	+		Pf1N1B4_3469	0.73	-1.0
3,875,597	+		Pf1N1B4_3469	0.73	+0.5
3,875,598	-		Pf1N1B4_3469	0.73	+2.0
3,875,671	+		Pf1N1B4_3469	0.83	+0.8
3,875,671	+		Pf1N1B4_3469	0.83	-0.0
3,875,671	+		Pf1N1B4_3469	0.83	+0.7
3,875,671	+		Pf1N1B4_3469	0.83	-0.4
3,875,672	-		Pf1N1B4_3469	0.84	-0.0
3,875,672	-		Pf1N1B4_3469	0.84	+1.1
3,875,679	+		Pf1N1B4_3469	0.85	+0.3
3,875,679	+				+2.5
3,875,680	-		Pf1N1B4_3469	0.85	+0.2
3,875,732	+				+0.4
3,875,850	-				+1.5
3,875,850	-				-0.6
3,875,856	+				-2.4
3,875,856	+				-0.6
3,875,907	+				-1.9
3,875,907	+				-0.2
3,875,907	+				+0.4
3,875,908	-				+0.1
3,875,908	-				-0.7
3,875,918	+				-2.8