Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3445

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,840,539	+				-1.4
3,840,539	+				-1.4
3,840,540	-				-2.2
3,840,542	+				-1.0
3,840,542	+				+0.2
3,840,554	+				-2.4
3,840,680	-				-2.4
3,840,748	+				+0.4
3,840,756	-				-1.0
3,840,759	+				-2.6
3,840,759	+				+1.0
3,840,851	-				-0.6
3,841,244	+		Pf1N1B4_3445	0.33	-1.8
3,841,354	+		Pf1N1B4_3445	0.41	-1.7
3,841,504	+		Pf1N1B4_3445	0.52	-1.4
3,841,505	-		Pf1N1B4_3445	0.52	-1.8
3,841,589	-				+1.0
3,841,589	-		Pf1N1B4_3445	0.59	-1.6
3,841,723	+		Pf1N1B4_3445	0.69	-2.0
3,842,173	+				-1.0
3,842,304	+		Pf1N1B4_3446	0.48	-0.6
3,842,305	-		Pf1N1B4_3446	0.48	-0.9
3,842,330	+		Pf1N1B4_3446	0.57	-0.6
3,842,363	-		Pf1N1B4_3446	0.68	-2.0
3,842,371	-		Pf1N1B4_3446	0.71	-0.6
3,842,371	-		Pf1N1B4_3446	0.71	-0.5
3,842,467	+				+0.5
3,842,467	+				-0.8
3,842,467	+				+1.0
3,842,467	+				-0.9
3,842,467	+				-0.3
3,842,468	-				+1.0
3,842,909	+		Pf1N1B4_3447	0.44	-0.9
3,842,960	+		Pf1N1B4_3447	0.49	-1.8
3,843,046	+		Pf1N1B4_3447	0.57	+0.4
3,843,071	+		Pf1N1B4_3447	0.60	+1.0
3,843,071	+		Pf1N1B4_3447	0.60	-1.5
3,843,071	+		Pf1N1B4_3447	0.60	+1.0
3,843,071	+		Pf1N1B4_3447	0.60	-0.8
3,843,071	+				-2.4
3,843,071	+				+0.6
3,843,071	+		Pf1N1B4_3447	0.60	+1.0
3,843,072	-		Pf1N1B4_3447	0.60	-2.0
3,843,072	-				+1.0
3,843,072	-		Pf1N1B4_3447	0.60	-0.8
3,843,072	-		Pf1N1B4_3447	0.60	-1.0
3,843,073	+		Pf1N1B4_3447	0.60	-1.4
3,843,073	+		Pf1N1B4_3447	0.60	+3.5
3,843,074	-		Pf1N1B4_3447	0.60	+1.0
3,843,074	-		Pf1N1B4_3447	0.60	+0.4
3,843,077	+		Pf1N1B4_3447	0.60	-2.2
3,843,077	+		Pf1N1B4_3447	0.60	-0.4
3,843,077	+		Pf1N1B4_3447	0.60	-0.5
3,843,077	+				+2.5
3,843,078	-		Pf1N1B4_3447	0.60	-1.6
3,843,078	-		Pf1N1B4_3447	0.60	-1.0
3,843,078	-		Pf1N1B4_3447	0.60	-1.0
3,843,078	-				+2.0
3,843,078	-		Pf1N1B4_3447	0.60	-2.8