Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3341

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,726,675	+				-0.6
3,726,676	-				+0.2
3,726,705	+		Pf1N1B4_3340	0.11	-0.5
3,726,787	+		Pf1N1B4_3340	0.19	+0.5
3,726,787	+		Pf1N1B4_3340	0.19	+1.0
3,726,787	+		Pf1N1B4_3340	0.19	-0.0
3,726,787	+		Pf1N1B4_3340	0.19	-1.6
3,726,788	-		Pf1N1B4_3340	0.20	+1.2
3,726,788	-				+1.0
3,726,788	-		Pf1N1B4_3340	0.20	-0.0
3,726,788	-		Pf1N1B4_3340	0.20	+1.8
3,726,788	-		Pf1N1B4_3340	0.20	-0.0
3,726,788	-		Pf1N1B4_3340	0.20	-1.4
3,726,793	+		Pf1N1B4_3340	0.20	-0.6
3,726,793	+		Pf1N1B4_3340	0.20	-0.5
3,726,794	-		Pf1N1B4_3340	0.20	-2.2
3,726,794	-		Pf1N1B4_3340	0.20	+0.5
3,726,794	-		Pf1N1B4_3340	0.20	+0.8
3,726,877	+		Pf1N1B4_3340	0.29	+0.1
3,726,877	+		Pf1N1B4_3340	0.29	-0.0
3,726,878	-				-0.0
3,726,878	-		Pf1N1B4_3340	0.29	+0.5
3,726,878	-				-0.6
3,726,954	+		Pf1N1B4_3340	0.37	+1.4
3,726,955	-		Pf1N1B4_3340	0.37	-0.4
3,726,977	+		Pf1N1B4_3340	0.39	-0.0
3,726,977	+		Pf1N1B4_3340	0.39	-0.0
3,726,977	+		Pf1N1B4_3340	0.39	-0.1
3,726,977	+		Pf1N1B4_3340	0.39	-3.3
3,727,089	+		Pf1N1B4_3340	0.51	-1.0
3,727,097	-		Pf1N1B4_3340	0.52	-0.6
3,727,176	+		Pf1N1B4_3340	0.60	-1.4
3,727,177	-				+1.0
3,727,279	+		Pf1N1B4_3340	0.71	-0.4
3,727,280	-		Pf1N1B4_3340	0.71	-0.5
3,727,309	+		Pf1N1B4_3340	0.74	+0.5
3,727,310	-		Pf1N1B4_3340	0.75	-0.7
3,727,325	+		Pf1N1B4_3340	0.76	+1.6
3,727,387	-		Pf1N1B4_3340	0.83	+1.4
3,727,401	+		Pf1N1B4_3340	0.84	+0.1
3,727,969	-		Pf1N1B4_3341	0.34	-0.3
3,728,047	+		Pf1N1B4_3341	0.41	-0.2
3,728,047	+		Pf1N1B4_3341	0.41	-1.0
3,728,047	+		Pf1N1B4_3341	0.41	-0.0
3,728,047	+		Pf1N1B4_3341	0.41	-1.0
3,728,047	+		Pf1N1B4_3341	0.41	-1.0
3,728,048	-				+2.0
3,728,048	-		Pf1N1B4_3341	0.41	-2.2
3,728,048	-		Pf1N1B4_3341	0.41	+0.3
3,728,050	+		Pf1N1B4_3341	0.41	-2.2
3,728,050	+		Pf1N1B4_3341	0.41	+1.0
3,728,050	+		Pf1N1B4_3341	0.41	-1.2
3,728,051	-				+0.4
3,728,080	+		Pf1N1B4_3341	0.43	-3.1
3,728,081	-				-0.6
3,728,081	-		Pf1N1B4_3341	0.43	-2.9
3,728,081	-		Pf1N1B4_3341	0.43	-0.2
3,728,329	+		Pf1N1B4_3341	0.64	-0.0
3,728,329	+		Pf1N1B4_3341	0.64	-0.5
3,728,330	-				+0.4
3,728,330	-		Pf1N1B4_3341	0.64	-0.4
3,728,751	-				+2.1
3,728,826	+				-0.3
3,728,827	-				-2.4
3,728,841	+				+0.2
3,728,841	+				-0.8
3,728,842	-				-0.4
3,728,847	+				+0.3
3,728,896	+				-2.0
3,728,913	+				-1.0
3,728,914	-				-0.9
3,728,918	-				-0.3
3,729,066	+				+2.3
3,729,066	+				-1.4
3,729,082	-				-0.5
3,729,082	-				-1.2
3,729,419	+		Pf1N1B4_3342	0.11	-0.4
3,729,420	-		Pf1N1B4_3342	0.11	+2.0
3,729,420	-		Pf1N1B4_3342	0.11	+0.0
3,729,446	-		Pf1N1B4_3342	0.13	+1.3
3,729,556	+		Pf1N1B4_3342	0.21	-1.4
3,729,556	+		Pf1N1B4_3342	0.21	-1.8
3,729,556	+		Pf1N1B4_3342	0.21	-2.7
3,729,719	+		Pf1N1B4_3342	0.33	+0.2
3,729,719	+		Pf1N1B4_3342	0.33	+1.7
3,729,719	+		Pf1N1B4_3342	0.33	-0.7
3,729,719	+				+1.8
3,729,719	+		Pf1N1B4_3342	0.33	+2.4
3,729,720	-		Pf1N1B4_3342	0.33	-0.0
3,729,720	-		Pf1N1B4_3342	0.33	-0.6
3,729,720	-		Pf1N1B4_3342	0.33	-0.7
3,729,720	-		Pf1N1B4_3342	0.33	+0.5