Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3193

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,573,036	+				+0.4
3,573,037	-				+0.7
3,573,037	-				+1.0
3,573,047	+				-1.6
3,573,048	-				+1.0
3,573,048	-				+1.0
3,573,060	+				+0.7
3,573,060	+				+2.0
3,573,060	+				-1.7
3,573,135	+				-1.0
3,573,135	+				+1.0
3,573,135	+		Pf1N1B4_3192	0.14	-0.5
3,573,136	-		Pf1N1B4_3192	0.14	-0.6
3,573,343	+		Pf1N1B4_3192	0.41	+0.4
3,573,343	+		Pf1N1B4_3192	0.41	-1.0
3,573,343	+		Pf1N1B4_3192	0.41	-0.6
3,573,343	+		Pf1N1B4_3192	0.41	-1.0
3,573,343	+		Pf1N1B4_3192	0.41	-0.6
3,573,344	-		Pf1N1B4_3192	0.41	+0.2
3,573,344	-		Pf1N1B4_3192	0.41	+1.2
3,573,344	-		Pf1N1B4_3192	0.41	-0.3
3,573,344	-		Pf1N1B4_3192	0.41	-1.1
3,573,344	-		Pf1N1B4_3192	0.41	-0.6
3,573,344	-		Pf1N1B4_3192	0.41	+0.1
3,573,344	-		Pf1N1B4_3192	0.41	+0.7
3,573,489	+		Pf1N1B4_3192	0.60	+0.5
3,573,489	+		Pf1N1B4_3192	0.60	+1.1
3,573,490	-		Pf1N1B4_3192	0.60	-1.5
3,573,490	-		Pf1N1B4_3192	0.60	-0.0
3,573,525	+		Pf1N1B4_3192	0.65	+0.1
3,573,590	-		Pf1N1B4_3192	0.74	-0.1
3,573,694	+		Pf1N1B4_3192	0.87	+0.6
3,573,694	+		Pf1N1B4_3192	0.87	-0.8
3,573,694	+		Pf1N1B4_3192	0.87	+1.2
3,573,697	-				-0.6
3,573,697	-		Pf1N1B4_3192	0.88	-1.3
3,573,697	-		Pf1N1B4_3192	0.88	+1.6
3,573,787	+				-1.1
3,573,787	+				+0.3
3,573,787	+				-0.5
3,573,787	+				-0.6
3,573,788	-				+2.3
3,573,788	-				-1.6
3,573,788	-				+0.4
3,573,788	-				-1.3
3,573,788	-				+1.0
3,573,788	-				+0.4
3,573,788	-				+1.0
3,573,788	-				-0.6
3,573,951	+		Pf1N1B4_3193	0.11	-0.5
3,573,952	-		Pf1N1B4_3193	0.11	-1.3
3,574,082	+		Pf1N1B4_3193	0.39	-1.6
3,574,082	+		Pf1N1B4_3193	0.39	+0.7
3,574,082	+				-1.3
3,574,082	+		Pf1N1B4_3193	0.39	-1.0
3,574,082	+		Pf1N1B4_3193	0.39	-3.0
3,574,082	+		Pf1N1B4_3193	0.39	-3.3
3,574,082	+		Pf1N1B4_3193	0.39	+0.7
3,574,082	+		Pf1N1B4_3193	0.39	+0.5
3,574,082	+		Pf1N1B4_3193	0.39	-1.7
3,574,082	+				-1.6
3,574,082	+		Pf1N1B4_3193	0.39	+0.3
3,574,083	-		Pf1N1B4_3193	0.40	+0.1
3,574,083	-				-1.0
3,574,083	-		Pf1N1B4_3193	0.40	+0.6
3,574,083	-		Pf1N1B4_3193	0.40	+0.7
3,574,083	-		Pf1N1B4_3193	0.40	-0.6
3,574,083	-		Pf1N1B4_3193	0.40	+1.0
3,574,083	-		Pf1N1B4_3193	0.40	+0.8
3,574,083	-		Pf1N1B4_3193	0.40	-0.3
3,574,083	-		Pf1N1B4_3193	0.40	+0.5
3,574,083	-		Pf1N1B4_3193	0.40	-1.0
3,574,083	-		Pf1N1B4_3193	0.40	+1.5
3,574,083	-		Pf1N1B4_3193	0.40	+0.4
3,574,083	-		Pf1N1B4_3193	0.40	-1.0
3,574,083	-		Pf1N1B4_3193	0.40	-1.3
3,574,083	-		Pf1N1B4_3193	0.40	-0.8
3,574,083	-				+1.0
3,574,083	-		Pf1N1B4_3193	0.40	+0.1
3,574,083	-				+2.0
3,574,083	-		Pf1N1B4_3193	0.40	-1.3
3,574,083	-		Pf1N1B4_3193	0.40	-1.3
3,574,083	-		Pf1N1B4_3193	0.40	-0.9
3,574,083	-		Pf1N1B4_3193	0.40	-2.2
3,574,083	-		Pf1N1B4_3193	0.40	-1.0
3,574,083	-		Pf1N1B4_3193	0.40	-0.0
3,574,083	-		Pf1N1B4_3193	0.40	+1.0
3,574,083	-		Pf1N1B4_3193	0.40	-0.0
3,574,083	-		Pf1N1B4_3193	0.40	-2.9
3,574,083	-		Pf1N1B4_3193	0.40	-0.3
3,574,083	-		Pf1N1B4_3193	0.40	+0.7
3,574,083	-		Pf1N1B4_3193	0.40	+0.3
3,574,083	-		Pf1N1B4_3193	0.40	-0.7
3,574,083	-		Pf1N1B4_3193	0.40	-0.3
3,574,106	+		Pf1N1B4_3193	0.45	-3.0
3,574,219	+		Pf1N1B4_3193	0.69	+0.2
3,574,219	+		Pf1N1B4_3193	0.69	+0.1
3,574,220	-		Pf1N1B4_3193	0.69	-0.2
3,574,220	-		Pf1N1B4_3193	0.69	-0.5
3,574,336	-				-1.0
3,574,336	-				+0.6
3,574,337	+				+1.0
3,574,338	-				-1.2
3,574,338	-				+1.0
3,574,366	-				+2.3
3,574,366	-				-0.6
3,574,366	-				+0.7