Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3150

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,529,869	+		Pf1N1B4_3148	0.17	+0.4
3,529,870	-		Pf1N1B4_3148	0.18	+0.1
3,529,927	+		Pf1N1B4_3148	0.25	+1.0
3,530,063	+		Pf1N1B4_3148	0.44	+0.2
3,530,064	-		Pf1N1B4_3148	0.44	-1.3
3,530,064	-		Pf1N1B4_3148	0.44	+1.3
3,530,084	+				-0.0
3,530,105	-		Pf1N1B4_3148	0.49	-0.6
3,530,360	+		Pf1N1B4_3148	0.83	-2.2
3,530,360	+		Pf1N1B4_3148	0.83	+1.7
3,530,360	+		Pf1N1B4_3148	0.83	+1.3
3,530,361	-		Pf1N1B4_3148	0.84	-1.1
3,530,384	+		Pf1N1B4_3148	0.87	-1.3
3,530,385	-		Pf1N1B4_3148	0.87	+0.6
3,530,454	+				+0.4
3,530,454	+				+0.2
3,530,454	+				-1.3
3,530,454	+				+1.0
3,530,454	+				-1.3
3,530,493	+				-1.8
3,530,610	+		Pf1N1B4_3149	0.31	-2.6
3,530,611	-		Pf1N1B4_3149	0.32	+0.2
3,530,611	-		Pf1N1B4_3149	0.32	-0.6
3,530,731	+				-0.0
3,530,731	+				-1.0
3,530,731	+				-0.0
3,530,732	-				+0.1
3,530,732	-				+2.4
3,530,732	-				-0.2
3,530,732	-				-1.3
3,530,885	+		Pf1N1B4_3150	0.25	-0.6
3,530,886	-		Pf1N1B4_3150	0.25	+0.4
3,531,244	+		Pf1N1B4_3150	0.80	+0.2
3,531,370	+				-0.6
3,531,370	+				+2.4
3,531,370	+				+0.7
3,531,370	+				+1.0
3,531,370	+				+0.4
3,531,370	+				+1.0
3,531,379	-				+0.6
3,531,411	+				+0.6
3,531,411	+				-0.1
3,531,411	+				+0.8
3,531,443	-				+1.0
3,531,447	+				-0.4
3,531,447	+				+1.4
3,531,447	+				-1.8
3,531,447	+				-0.4
3,531,448	-				+0.4
3,531,448	-				-0.3
3,531,448	-				+0.5
3,531,448	-				+1.3
3,531,448	-				-0.0
3,531,448	-				+1.1
3,531,808	+				-0.0
3,531,808	+				-0.3
3,531,905	-				-2.0
3,531,905	-				-1.0
3,531,928	+		Pf1N1B4_3152	0.13	-0.0
3,531,928	+		Pf1N1B4_3152	0.13	-1.6
3,531,928	+		Pf1N1B4_3152	0.13	-0.2
3,531,928	+		Pf1N1B4_3152	0.13	-0.0
3,531,928	+		Pf1N1B4_3152	0.13	+2.4
3,531,929	-		Pf1N1B4_3152	0.13	+0.6
3,531,929	-		Pf1N1B4_3152	0.13	+0.4
3,532,300	-		Pf1N1B4_3152	0.53	+0.4
3,532,319	-		Pf1N1B4_3152	0.55	+1.3