Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3146

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,528,136	+		Pf1N1B4_3145	0.73	-0.1
3,528,136	+		Pf1N1B4_3145	0.73	-0.2
3,528,137	-		Pf1N1B4_3145	0.73	-1.3
3,528,137	-		Pf1N1B4_3145	0.73	-0.0
3,528,150	+		Pf1N1B4_3145	0.74	-1.6
3,528,586	+				+0.5
3,528,587	-				+1.7
3,528,617	+				-0.2
3,528,618	-				-1.2
3,528,618	-				+0.6
3,528,679	+				-1.0
3,528,679	+				-1.0
3,528,743	+				-0.8
3,528,744	-				-0.6
3,528,744	-				-0.6
3,528,791	+				-0.8
3,528,791	+				+0.2
3,528,791	+				+0.2
3,528,792	-				+0.5
3,528,792	-				-1.3
3,528,792	-				-0.8
3,528,792	-				-0.6
3,528,810	+				-0.6
3,528,813	+				-0.6
3,528,813	+				-1.3
3,528,814	-				-1.0
3,528,814	-				-1.3
3,528,814	-				-1.5
3,528,814	-				-1.0
3,528,814	-				+0.7
3,528,818	+				+0.5
3,528,819	-				+0.4
3,528,819	-				+0.6
3,528,965	+		Pf1N1B4_3146	0.18	-0.2
3,529,058	+		Pf1N1B4_3146	0.66	+0.2
3,529,126	-				+0.2
3,529,293	+		Pf1N1B4_3147	0.40	-2.8
3,529,293	+		Pf1N1B4_3147	0.40	-1.6
3,529,294	-		Pf1N1B4_3147	0.40	-1.5
3,529,294	-		Pf1N1B4_3147	0.40	-3.6
3,529,294	-		Pf1N1B4_3147	0.40	-2.6
3,529,378	+		Pf1N1B4_3147	0.60	-2.0
3,529,378	+		Pf1N1B4_3147	0.60	-1.5
3,529,378	+		Pf1N1B4_3147	0.60	-2.5
3,529,378	+		Pf1N1B4_3147	0.60	-1.0
3,529,378	+		Pf1N1B4_3147	0.60	-1.8
3,529,378	+		Pf1N1B4_3147	0.60	-2.2
3,529,378	+		Pf1N1B4_3147	0.60	-2.0
3,529,379	-		Pf1N1B4_3147	0.60	-0.0
3,529,379	-		Pf1N1B4_3147	0.60	-2.0
3,529,379	-		Pf1N1B4_3147	0.60	-1.8
3,529,379	-		Pf1N1B4_3147	0.60	-3.6
3,529,379	-		Pf1N1B4_3147	0.60	-3.7
3,529,379	-		Pf1N1B4_3147	0.60	-1.6
3,529,379	-		Pf1N1B4_3147	0.60	-0.3
3,529,379	-		Pf1N1B4_3147	0.60	-2.3
3,529,379	-		Pf1N1B4_3147	0.60	-1.9
3,529,380	+		Pf1N1B4_3147	0.60	-1.6
3,529,380	+		Pf1N1B4_3147	0.60	-4.0
3,529,380	+		Pf1N1B4_3147	0.60	-1.3
3,529,381	-		Pf1N1B4_3147	0.60	-3.1
3,529,381	-		Pf1N1B4_3147	0.60	-1.8
3,529,381	-		Pf1N1B4_3147	0.60	-2.0
3,529,381	-		Pf1N1B4_3147	0.60	-3.4
3,529,436	+		Pf1N1B4_3147	0.73	+0.4
3,529,437	-		Pf1N1B4_3147	0.73	-0.8
3,529,437	-		Pf1N1B4_3147	0.73	-2.5
3,529,437	-		Pf1N1B4_3147	0.73	-1.6
3,529,437	-		Pf1N1B4_3147	0.73	-2.4
3,529,437	-		Pf1N1B4_3147	0.73	-2.6
3,529,538	-				-3.6
3,529,618	+				+0.7
3,529,618	+				-0.3
3,529,618	+				+0.3
3,529,618	+				-1.0
3,529,618	+				-2.6
3,529,618	+				-1.8
3,529,619	-				+1.7
3,529,620	+				-2.3
3,529,621	-				+0.4
3,529,621	-				-1.6
3,529,621	-				-0.3
3,529,621	-				-0.0
3,529,681	+				+0.5
3,529,681	+				-0.6
3,529,869	+		Pf1N1B4_3148	0.17	+0.4
3,529,870	-		Pf1N1B4_3148	0.18	+0.1
3,529,927	+		Pf1N1B4_3148	0.25	+1.0
3,530,063	+		Pf1N1B4_3148	0.44	+0.2
3,530,064	-		Pf1N1B4_3148	0.44	-1.3
3,530,064	-		Pf1N1B4_3148	0.44	+1.3
3,530,084	+				-0.0
3,530,105	-		Pf1N1B4_3148	0.49	-0.6