Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3074

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,456,711	+				-1.6
3,456,955	+				-1.6
3,456,955	+				+0.6
3,456,955	+				+1.3
3,456,955	+				+1.6
3,456,955	+				+1.0
3,456,956	-				-0.2
3,456,956	-				+2.3
3,456,956	-				-0.0
3,456,956	-				+0.2
3,456,956	-				+0.3
3,456,959	+				+1.1
3,456,960	-				-0.3
3,456,960	-				-0.0
3,456,960	-				-1.3
3,457,033	+				-0.1
3,457,034	-				-0.2
3,457,034	-				-0.6
3,457,034	-				-0.3
3,457,034	-				-1.3
3,457,101	+				+0.3
3,457,101	+				+0.4
3,457,102	-				+1.6
3,457,102	-				+0.0
3,457,102	-				-2.5
3,457,102	-				-0.4
3,457,102	-				+0.8
3,457,102	-				+1.0
3,457,139	-				+2.2
3,457,146	+				-1.1
3,457,154	+				+0.4
3,457,154	+				+1.4
3,457,154	+				+2.0
3,457,155	-				-1.2
3,457,155	-				-0.7
3,457,155	-				+0.2
3,457,212	+				-0.3
3,457,213	-				-1.0
3,457,213	-				-0.0
3,457,213	-				-1.2
3,457,213	-				-0.4
3,457,215	-				+0.7
3,457,215	-				-0.4
3,457,249	+				-0.6
3,457,286	+				-0.6
3,457,286	+				-1.0
3,457,286	+				-0.2
3,457,287	-				-0.2
3,457,577	+		Pf1N1B4_3074	0.42	-1.5
3,457,578	-		Pf1N1B4_3074	0.42	-1.0
3,457,823	+		Pf1N1B4_3074	0.72	-0.1
3,457,823	+		Pf1N1B4_3074	0.72	-2.5
3,458,200	+				-1.8
3,458,263	-				+1.0
3,458,641	+				+0.1
3,458,641	+				-1.3
3,458,641	+				+1.2
3,458,641	+				-0.5
3,458,642	-				-0.2
3,458,642	-				-0.0
3,458,765	+		Pf1N1B4_3076	0.16	-0.0
3,458,766	-		Pf1N1B4_3076	0.16	-2.5
3,458,857	+		Pf1N1B4_3076	0.23	-2.1
3,458,857	+		Pf1N1B4_3076	0.23	-1.7
3,458,858	-		Pf1N1B4_3076	0.24	-1.8
3,458,858	-		Pf1N1B4_3076	0.24	-1.0
3,458,858	-		Pf1N1B4_3076	0.24	-1.1
3,458,858	-		Pf1N1B4_3076	0.24	-0.6
3,458,858	-		Pf1N1B4_3076	0.24	+0.2
3,459,008	-		Pf1N1B4_3076	0.36	-1.0