Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_30

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
31,892	-				-1.2
31,952	+				+0.1
31,952	+				-0.2
31,958	+				-0.2
31,958	+				-0.2
31,959	-				+0.8
31,959	-				-1.0
31,959	-				-0.1
31,959	-				-0.2
31,959	-				+0.0
32,001	+				-2.3
32,002	-				-0.7
32,144	+		Pf1N1B4_28	0.79	+0.3
32,170	+				-1.2
32,171	-				+1.6
32,171	-				+1.8
32,223	-		Pf1N1B4_29	0.18	-1.3
32,223	-		Pf1N1B4_29	0.18	-0.2
32,232	-		Pf1N1B4_29	0.22	-2.0
32,232	-		Pf1N1B4_29	0.22	-2.2
32,232	-		Pf1N1B4_29	0.22	+0.8
32,463	+				+0.3
32,517	+				+3.8
32,526	-				+0.8
32,811	+				-1.0
32,844	+				-0.2
32,845	-				+0.6
32,880	+				-0.3
32,880	+				+0.3
32,880	+				-1.2
32,881	-				+2.1
32,881	-				-0.7
32,881	-				-0.3
32,943	+				-1.2
32,944	-				-1.5
33,271	+				+2.8
33,272	-				+1.2
33,275	-				-0.7
33,275	-		Pf1N1B4_30	0.15	+1.5
33,639	-		Pf1N1B4_30	0.27	+1.1
33,639	-		Pf1N1B4_30	0.27	+0.7
33,655	+		Pf1N1B4_30	0.27	-0.5
33,916	-		Pf1N1B4_30	0.36	-0.2
34,061	+		Pf1N1B4_30	0.40	-0.4
34,083	+		Pf1N1B4_30	0.41	+1.3
34,084	-		Pf1N1B4_30	0.41	-0.5
34,084	-		Pf1N1B4_30	0.41	+1.8
34,110	+		Pf1N1B4_30	0.42	-0.2
34,111	-		Pf1N1B4_30	0.42	-0.4
34,187	+		Pf1N1B4_30	0.45	+1.1
34,188	-				-1.2
34,188	-		Pf1N1B4_30	0.45	-1.1
34,188	-		Pf1N1B4_30	0.45	+0.1
34,190	-		Pf1N1B4_30	0.45	+2.3
34,368	+		Pf1N1B4_30	0.50	+1.8
34,368	+		Pf1N1B4_30	0.50	-0.6
34,369	-		Pf1N1B4_30	0.50	+0.4
34,384	-		Pf1N1B4_30	0.51	-1.7
34,451	-		Pf1N1B4_30	0.53	+0.8
34,451	-		Pf1N1B4_30	0.53	+1.4
34,454	+		Pf1N1B4_30	0.53	-1.7
34,455	-				-1.2
34,455	-		Pf1N1B4_30	0.53	-2.0
34,455	-				-1.2
34,518	+		Pf1N1B4_30	0.55	-1.2
34,556	-		Pf1N1B4_30	0.56	-1.5
34,733	-				+0.8
34,733	-		Pf1N1B4_30	0.62	-1.7
34,913	-		Pf1N1B4_30	0.68	+0.0
34,913	-		Pf1N1B4_30	0.68	+0.4
35,033	-		Pf1N1B4_30	0.72	-2.3
35,164	+		Pf1N1B4_30	0.76	-0.2
35,165	-		Pf1N1B4_30	0.76	-0.6
35,320	-		Pf1N1B4_30	0.81	+0.6
35,463	+		Pf1N1B4_30	0.86	-0.4
35,600	-				-1.0
35,610	+				-2.5
35,611	-				+0.8
35,611	-				-0.5
35,662	-				+0.4
35,699	+				-0.2
35,812	-				-2.0
36,245	+				+0.4
36,245	+		Pf1N1B4_31	0.31	+2.1
36,370	+		Pf1N1B4_31	0.42	-1.0
36,370	+		Pf1N1B4_31	0.42	+1.0
36,479	-		Pf1N1B4_31	0.52	-1.5
36,479	-		Pf1N1B4_31	0.52	+0.4
36,479	-		Pf1N1B4_31	0.52	-1.2
36,479	-		Pf1N1B4_31	0.52	+1.1
36,560	-		Pf1N1B4_31	0.59	-1.7
36,750	+		Pf1N1B4_31	0.76	+1.7
36,751	-		Pf1N1B4_31	0.76	+0.7
36,751	-		Pf1N1B4_31	0.76	+0.1