Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2932

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,287,612	+				-1.9
3,287,612	+				-1.0
3,287,612	+				+2.0
3,287,632	-				-0.8
3,287,632	-				+0.9
3,287,637	+				+1.4
3,287,642	+				-1.0
3,287,686	+				+0.7
3,287,686	+				-0.7
3,287,687	-				-1.0
3,287,687	-				+0.4
3,287,687	-				+0.6
3,287,687	-				+1.5
3,287,687	-				+0.8
3,287,687	-				-0.3
3,287,687	-				-1.8
3,287,687	-				+0.5
3,287,702	+				-1.0
3,287,713	+				-0.8
3,287,864	+		Pf1N1B4_2931	0.20	+0.0
3,287,864	+		Pf1N1B4_2931	0.20	-0.7
3,287,864	+		Pf1N1B4_2931	0.20	+0.8
3,287,865	-		Pf1N1B4_2931	0.20	+0.5
3,287,865	-		Pf1N1B4_2931	0.20	-0.8
3,287,865	-		Pf1N1B4_2931	0.20	-0.1
3,288,028	-		Pf1N1B4_2931	0.38	+1.0
3,288,278	+		Pf1N1B4_2931	0.66	+1.4
3,288,278	+		Pf1N1B4_2931	0.66	-1.4
3,288,279	-		Pf1N1B4_2931	0.66	+1.6
3,288,279	-		Pf1N1B4_2931	0.66	-0.5
3,288,279	-		Pf1N1B4_2931	0.66	-1.8
3,288,292	+		Pf1N1B4_2931	0.67	-1.8
3,288,339	+		Pf1N1B4_2931	0.73	-0.4
3,288,339	+		Pf1N1B4_2931	0.73	-1.2
3,288,339	+		Pf1N1B4_2931	0.73	-1.3
3,288,339	+		Pf1N1B4_2931	0.73	+0.0
3,288,339	+		Pf1N1B4_2931	0.73	-1.3
3,288,339	+		Pf1N1B4_2931	0.73	-1.5
3,288,339	+		Pf1N1B4_2931	0.73	-2.2
3,288,339	+		Pf1N1B4_2931	0.73	-0.8
3,288,339	+		Pf1N1B4_2931	0.73	+0.9
3,288,339	+		Pf1N1B4_2931	0.73	+0.6
3,288,340	-		Pf1N1B4_2931	0.73	-1.0
3,288,340	-		Pf1N1B4_2931	0.73	+1.2
3,288,341	+		Pf1N1B4_2931	0.73	-1.8
3,288,341	+				+0.0
3,288,341	+		Pf1N1B4_2931	0.73	-0.5
3,288,341	+		Pf1N1B4_2931	0.73	+0.0
3,288,341	+		Pf1N1B4_2931	0.73	-1.0
3,288,341	+		Pf1N1B4_2931	0.73	-0.1
3,288,341	+		Pf1N1B4_2931	0.73	-0.5
3,288,341	+		Pf1N1B4_2931	0.73	+0.5
3,288,341	+		Pf1N1B4_2931	0.73	-0.1
3,288,341	+		Pf1N1B4_2931	0.73	+1.0
3,288,341	+		Pf1N1B4_2931	0.73	+0.8
3,288,341	+		Pf1N1B4_2931	0.73	+0.6
3,288,341	+		Pf1N1B4_2931	0.73	+0.7
3,288,341	+		Pf1N1B4_2931	0.73	+0.7
3,288,342	-		Pf1N1B4_2931	0.73	+0.3
3,288,342	-				-1.0
3,288,342	-		Pf1N1B4_2931	0.73	-1.0
3,288,342	-		Pf1N1B4_2931	0.73	+0.6
3,288,342	-		Pf1N1B4_2931	0.73	+0.0
3,288,585	+				-0.4
3,289,616	+				+0.9
3,289,706	+				-1.4
3,289,706	+				+1.0
3,289,706	+				+1.0
3,289,706	+				+1.0
3,289,707	-				+0.8
3,289,707	-				-0.3
3,289,707	-				+0.2
3,289,707	-				+2.0
3,289,707	-				+1.4
3,289,906	+		Pf1N1B4_2933	0.16	-1.1
3,289,907	-		Pf1N1B4_2933	0.16	-0.5
3,290,084	+				+1.0
3,290,084	+		Pf1N1B4_2933	0.30	+0.8
3,290,084	+		Pf1N1B4_2933	0.30	-1.5
3,290,084	+		Pf1N1B4_2933	0.30	+0.3
3,290,084	+		Pf1N1B4_2933	0.30	+3.0
3,290,084	+		Pf1N1B4_2933	0.30	+0.8
3,290,084	+		Pf1N1B4_2933	0.30	+1.0
3,290,085	-		Pf1N1B4_2933	0.30	+1.8
3,290,085	-		Pf1N1B4_2933	0.30	+0.6
3,290,085	-		Pf1N1B4_2933	0.30	-0.1
3,290,085	-		Pf1N1B4_2933	0.30	-1.8
3,290,085	-				-0.5
3,290,085	-		Pf1N1B4_2933	0.30	+2.6
3,290,085	-		Pf1N1B4_2933	0.30	+1.2
3,290,085	-		Pf1N1B4_2933	0.30	-1.4
3,290,085	-		Pf1N1B4_2933	0.30	-2.0
3,290,085	-		Pf1N1B4_2933	0.30	+0.7
3,290,085	-		Pf1N1B4_2933	0.30	-1.8
3,290,124	-		Pf1N1B4_2933	0.33	-0.5
3,290,124	-		Pf1N1B4_2933	0.33	-0.5
3,290,124	-		Pf1N1B4_2933	0.33	+1.7
3,290,124	-		Pf1N1B4_2933	0.33	-1.5
3,290,216	+		Pf1N1B4_2933	0.40	-0.2
3,290,217	-		Pf1N1B4_2933	0.40	-0.1
3,290,394	-		Pf1N1B4_2933	0.54	+0.0
3,290,394	-		Pf1N1B4_2933	0.54	+0.1
3,290,419	+		Pf1N1B4_2933	0.56	+0.0
3,290,419	+		Pf1N1B4_2933	0.56	-0.1
3,290,420	-		Pf1N1B4_2933	0.56	-0.5
3,290,420	-		Pf1N1B4_2933	0.56	+0.5