Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2730

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
3,068,732	-		Pf1N1B4_2729	0.21	+0.7
3,068,747	+		Pf1N1B4_2729	0.22	-1.2
3,068,747	+		Pf1N1B4_2729	0.22	+1.2
3,068,747	+		Pf1N1B4_2729	0.22	-0.2
3,068,747	+		Pf1N1B4_2729	0.22	+0.2
3,068,747	+		Pf1N1B4_2729	0.22	-0.6
3,068,747	+		Pf1N1B4_2729	0.22	+0.2
3,068,748	-		Pf1N1B4_2729	0.22	+0.7
3,068,748	-		Pf1N1B4_2729	0.22	+2.6
3,068,748	-		Pf1N1B4_2729	0.22	+0.6
3,068,748	-		Pf1N1B4_2729	0.22	+1.2
3,068,748	-		Pf1N1B4_2729	0.22	+1.0
3,068,748	-		Pf1N1B4_2729	0.22	-2.2
3,068,748	-				+2.5
3,068,748	-		Pf1N1B4_2729	0.22	-1.1
3,068,748	-		Pf1N1B4_2729	0.22	+1.6
3,068,748	-		Pf1N1B4_2729	0.22	-0.4
3,068,770	+		Pf1N1B4_2729	0.24	-0.4
3,068,771	-		Pf1N1B4_2729	0.25	+0.4
3,068,803	+		Pf1N1B4_2729	0.28	+0.2
3,068,866	+		Pf1N1B4_2729	0.33	-1.4
3,068,866	+		Pf1N1B4_2729	0.33	-1.8
3,068,866	+		Pf1N1B4_2729	0.33	+0.6
3,068,866	+		Pf1N1B4_2729	0.33	+1.6
3,068,866	+		Pf1N1B4_2729	0.33	-1.7
3,068,866	+		Pf1N1B4_2729	0.33	-1.2
3,068,867	-		Pf1N1B4_2729	0.33	-0.3
3,068,867	-				+2.2
3,068,867	-		Pf1N1B4_2729	0.33	+0.3
3,068,867	-		Pf1N1B4_2729	0.33	-3.2
3,068,867	-		Pf1N1B4_2729	0.33	-2.0
3,069,054	+		Pf1N1B4_2729	0.51	+1.6
3,069,124	+		Pf1N1B4_2729	0.57	-2.4
3,069,124	+		Pf1N1B4_2729	0.57	+1.2
3,069,229	+		Pf1N1B4_2729	0.67	+0.9
3,069,386	-		Pf1N1B4_2729	0.81	-1.0
3,069,403	+		Pf1N1B4_2729	0.83	+0.2
3,069,403	+		Pf1N1B4_2729	0.83	+1.6
3,069,517	+				+0.2
3,069,517	+				+0.6
3,069,597	+				+0.1
3,069,598	-				+1.2
3,069,598	-				+1.4
3,069,599	+				-0.8
3,069,599	+				-0.8
3,069,599	+				+0.8
3,069,600	-				-1.4
3,069,600	-				-2.8
3,069,600	-				+0.5
3,069,605	+				-1.7
3,069,656	+				-1.2
3,069,816	-		Pf1N1B4_2730	0.21	-1.5
3,069,962	+		Pf1N1B4_2730	0.42	+0.6
3,070,010	+				-0.8
3,070,010	+		Pf1N1B4_2730	0.49	+0.6
3,070,010	+		Pf1N1B4_2730	0.49	-0.2
3,070,010	+		Pf1N1B4_2730	0.49	-0.4
3,070,010	+		Pf1N1B4_2730	0.49	-1.8
3,070,011	-		Pf1N1B4_2730	0.50	+1.7
3,070,163	+		Pf1N1B4_2730	0.72	-0.0
3,070,163	+		Pf1N1B4_2730	0.72	-1.8
3,070,163	+		Pf1N1B4_2730	0.72	-0.5
3,070,163	+		Pf1N1B4_2730	0.72	+0.2
3,070,163	+		Pf1N1B4_2730	0.72	-0.3
3,070,163	+		Pf1N1B4_2730	0.72	-0.8
3,070,164	-		Pf1N1B4_2730	0.72	-1.7
3,070,164	-		Pf1N1B4_2730	0.72	+0.2
3,070,164	-		Pf1N1B4_2730	0.72	-0.8
3,070,164	-		Pf1N1B4_2730	0.72	+0.6
3,070,164	-		Pf1N1B4_2730	0.72	+1.7
3,070,164	-		Pf1N1B4_2730	0.72	+0.1
3,070,165	+		Pf1N1B4_2730	0.72	+1.9
3,070,165	+		Pf1N1B4_2730	0.72	-1.2
3,070,192	+		Pf1N1B4_2730	0.76	+0.5
3,070,192	+		Pf1N1B4_2730	0.76	-0.3
3,070,193	-		Pf1N1B4_2730	0.77	+0.2
3,070,193	-		Pf1N1B4_2730	0.77	-0.8
3,070,193	-		Pf1N1B4_2730	0.77	-0.4
3,070,193	-		Pf1N1B4_2730	0.77	+1.2
3,070,316	+				+0.2
3,070,316	+				+1.3
3,070,316	+				+1.4
3,070,317	-				-2.3
3,070,317	-				+1.4
3,070,317	-				-1.2
3,070,317	-				+0.6
3,070,317	-				+0.2
3,070,317	-				-0.7
3,070,333	+				+1.4
3,070,334	-				+2.7
3,070,334	-				-0.0
3,070,334	-				+0.2
3,070,334	-				-0.0
3,070,334	-				-1.2
3,070,334	-				-0.5
3,070,334	-				-0.4
3,070,334	-				+0.9
3,070,334	-				+0.7
3,070,388	+				-1.3
3,070,418	+				+1.4
3,070,418	+				-0.3
3,070,418	+				+0.2
3,070,418	+				+0.4
3,070,419	-				+1.2
3,070,419	-				+0.2
3,070,419	-				-1.7
3,070,452	-				-0.2
3,070,503	+				+1.2
3,070,517	+				-1.8
3,070,517	+				-1.7
3,070,517	+				-0.1
3,070,517	+				-1.2
3,070,517	+				-0.8
3,070,518	-				+0.3
3,070,518	-				+0.2
3,070,665	-		Pf1N1B4_2731	0.18	-2.2
3,070,665	-		Pf1N1B4_2731	0.18	-0.8
3,070,973	+		Pf1N1B4_2731	0.59	+0.2
3,070,974	-		Pf1N1B4_2731	0.59	-1.8
3,070,974	-		Pf1N1B4_2731	0.59	-0.8
3,070,974	-		Pf1N1B4_2731	0.59	+0.4
3,070,974	-		Pf1N1B4_2731	0.59	-2.0
3,071,072	-		Pf1N1B4_2731	0.72	+1.5
3,071,191	+		Pf1N1B4_2731	0.88	+1.9
3,071,192	-		Pf1N1B4_2731	0.88	+0.9
3,071,192	-		Pf1N1B4_2731	0.88	-1.2
3,071,192	-		Pf1N1B4_2731	0.88	+1.2
3,071,228	+				+2.2
3,071,229	-				-1.0
3,071,229	-				+0.2
3,071,229	-				+1.0
3,071,230	+				-1.2