Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2484

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,818,016	+				-0.5
2,818,016	+				-1.1
2,818,016	+				+0.9
2,818,016	+				-2.0
2,818,016	+				-0.1
2,818,017	-				+0.3
2,818,017	-				-2.0
2,818,017	-				-0.5
2,818,019	+				-0.1
2,818,019	+				+1.8
2,818,019	+				-1.8
2,818,020	-				+1.8
2,818,020	-				+1.2
2,818,020	-				+0.3
2,818,020	-				-0.1
2,818,061	-				+1.5
2,818,061	-				+0.0
2,818,095	+				+0.9
2,818,096	-				-0.6
2,818,096	-				+1.9
2,818,134	+				+1.7
2,818,134	+				-0.9
2,818,135	-				-0.1
2,818,169	+				+1.4
2,818,423	-		Pf1N1B4_2483	0.35	+0.4
2,818,670	-		Pf1N1B4_2483	0.67	-0.3
2,818,670	-		Pf1N1B4_2483	0.67	+1.3
2,818,801	+		Pf1N1B4_2483	0.84	-0.0
2,818,801	+				+1.2
2,818,801	+		Pf1N1B4_2483	0.84	+1.4
2,818,801	+		Pf1N1B4_2483	0.84	-1.1
2,818,801	+		Pf1N1B4_2483	0.84	-1.1
2,818,801	+		Pf1N1B4_2483	0.84	+0.6
2,818,802	-		Pf1N1B4_2483	0.84	-0.1
2,818,802	-		Pf1N1B4_2483	0.84	-1.0
2,818,802	-		Pf1N1B4_2483	0.84	-0.6
2,818,910	+				+0.7
2,818,910	+				+0.6
2,818,911	-				-0.9
2,818,911	-				+1.4
2,819,033	+		Pf1N1B4_2484	0.42	+0.8
2,819,034	-		Pf1N1B4_2484	0.43	-1.4
2,819,104	+		Pf1N1B4_2484	0.77	-3.0
2,819,104	+		Pf1N1B4_2484	0.77	-0.9
2,819,104	+				+0.2
2,819,104	+		Pf1N1B4_2484	0.77	-1.1
2,819,105	-		Pf1N1B4_2484	0.77	-0.4
2,819,105	-		Pf1N1B4_2484	0.77	+0.8
2,819,148	+				+2.2
2,819,149	-				+0.9
2,819,604	+		Pf1N1B4_2485	0.78	+1.6
2,819,604	+		Pf1N1B4_2485	0.78	+0.2
2,819,604	+		Pf1N1B4_2485	0.78	+0.2
2,819,605	-		Pf1N1B4_2485	0.78	+0.9
2,819,605	-		Pf1N1B4_2485	0.78	+1.2
2,819,744	-				+0.2
2,819,783	+				-0.8
2,819,784	-				+0.3
2,819,784	-				-0.4
2,819,814	+				-0.1
2,819,826	-				-1.1
2,819,859	+				+1.9
2,819,863	+				-0.5
2,819,863	+				+1.0
2,819,863	+				-0.6
2,819,863	+				-0.9
2,819,863	+				+0.9
2,819,863	+				-1.1
2,819,863	+				+1.5
2,819,863	+				-1.6
2,819,863	+				-2.7
2,819,864	-				-2.0
2,819,864	-				-0.8
2,819,894	-		Pf1N1B4_2486	0.32	+1.6
2,819,922	+		Pf1N1B4_2486	0.56	-0.4
2,819,923	-		Pf1N1B4_2486	0.57	-1.6
2,819,923	-		Pf1N1B4_2486	0.57	+0.9
2,819,923	-		Pf1N1B4_2486	0.57	+0.2
2,819,923	-		Pf1N1B4_2486	0.57	-2.4
2,820,131	+		Pf1N1B4_2487	0.18	+1.0
2,820,132	-		Pf1N1B4_2487	0.18	+1.0