Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2233

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,544,429	+		Pf1N1B4_2232	0.33	+0.4
2,544,486	+		Pf1N1B4_2232	0.39	-1.1
2,544,487	-		Pf1N1B4_2232	0.39	-0.5
2,544,525	+		Pf1N1B4_2232	0.43	+0.9
2,544,525	+		Pf1N1B4_2232	0.43	-1.3
2,544,526	-		Pf1N1B4_2232	0.43	+1.8
2,544,526	-		Pf1N1B4_2232	0.43	-2.1
2,544,588	+		Pf1N1B4_2232	0.49	-0.7
2,544,756	+		Pf1N1B4_2232	0.66	+0.4
2,544,756	+		Pf1N1B4_2232	0.66	-1.3
2,544,756	+		Pf1N1B4_2232	0.66	-2.1
2,544,756	+		Pf1N1B4_2232	0.66	+0.3
2,544,756	+		Pf1N1B4_2232	0.66	+0.4
2,544,757	-		Pf1N1B4_2232	0.66	+0.0
2,544,757	-		Pf1N1B4_2232	0.66	+0.4
2,544,757	-		Pf1N1B4_2232	0.66	-1.1
2,544,757	-		Pf1N1B4_2232	0.66	+1.6
2,544,757	-		Pf1N1B4_2232	0.66	-2.3
2,544,759	+				+0.3
2,544,997	+		Pf1N1B4_2232	0.90	-1.7
2,545,031	-				-0.7
2,545,112	+				-0.3
2,545,112	+				-0.3
2,545,112	+				+0.6
2,545,112	+				-0.1
2,545,112	+				-0.7
2,545,112	+				+0.6
2,545,112	+				-1.1
2,545,112	+				-0.3
2,545,112	+				+2.8
2,545,113	-				-1.9
2,545,113	-				+1.3
2,545,113	-				-1.9
2,545,113	-				-2.2
2,545,113	-				-0.8
2,545,113	-				-0.1
2,545,113	-				-0.2
2,545,262	+				-0.3
2,545,575	+		Pf1N1B4_2233	0.17	+0.8
2,545,575	+		Pf1N1B4_2233	0.17	-1.0
2,545,575	+		Pf1N1B4_2233	0.17	+0.7
2,545,575	+				+2.3
2,545,575	+				+0.3
2,545,576	-		Pf1N1B4_2233	0.17	+0.7
2,545,576	-		Pf1N1B4_2233	0.17	+0.5
2,545,576	-		Pf1N1B4_2233	0.17	+1.0
2,545,576	-		Pf1N1B4_2233	0.17	-0.3
2,545,576	-		Pf1N1B4_2233	0.17	-0.3
2,545,576	-		Pf1N1B4_2233	0.17	-2.2
2,545,576	-		Pf1N1B4_2233	0.17	-2.6
2,545,576	-		Pf1N1B4_2233	0.17	-1.2
2,545,576	-		Pf1N1B4_2233	0.17	-2.3
2,545,731	+		Pf1N1B4_2233	0.27	-1.3
2,545,732	-		Pf1N1B4_2233	0.27	-1.1
2,545,732	-		Pf1N1B4_2233	0.27	-1.4
2,545,732	-		Pf1N1B4_2233	0.27	-1.5
2,545,928	+		Pf1N1B4_2233	0.39	+1.3
2,545,947	+				+1.3
2,545,948	-		Pf1N1B4_2233	0.40	-3.0
2,546,032	-		Pf1N1B4_2233	0.46	-2.1
2,546,032	-		Pf1N1B4_2233	0.46	-1.1
2,546,097	+		Pf1N1B4_2233	0.50	-0.5
2,546,097	+		Pf1N1B4_2233	0.50	-0.2
2,546,149	+		Pf1N1B4_2233	0.53	-0.2
2,546,149	+		Pf1N1B4_2233	0.53	-0.5
2,546,150	-		Pf1N1B4_2233	0.53	+0.4
2,546,150	-		Pf1N1B4_2233	0.53	-1.3
2,546,232	+		Pf1N1B4_2233	0.58	-1.6
2,546,232	+		Pf1N1B4_2233	0.58	-1.7
2,546,259	+		Pf1N1B4_2233	0.60	-1.3
2,546,260	-		Pf1N1B4_2233	0.60	-2.4
2,546,427	+		Pf1N1B4_2233	0.70	-0.4
2,546,428	-				+1.3
2,546,523	+		Pf1N1B4_2233	0.77	-0.0
2,546,524	-		Pf1N1B4_2233	0.77	+2.8
2,546,609	+		Pf1N1B4_2233	0.82	-0.3
2,546,610	-		Pf1N1B4_2233	0.82	-1.4
2,546,649	+		Pf1N1B4_2233	0.84	+0.0
2,546,649	+		Pf1N1B4_2233	0.84	+1.3
2,546,649	+		Pf1N1B4_2233	0.84	-0.7
2,546,650	-		Pf1N1B4_2233	0.85	-2.1
2,546,650	-		Pf1N1B4_2233	0.85	-1.3
2,546,892	+				+0.5
2,546,892	+				-0.6
2,546,905	+				+1.3
2,546,906	-				+0.3
2,546,906	-				-0.7
2,546,918	+				-2.2
2,546,918	+				-1.7
2,546,918	+				+0.3
2,546,919	-				-2.3
2,547,063	-				-1.5
2,547,073	-				-0.6
2,547,073	-				+0.9
2,547,196	+				-1.2
2,547,252	-				-2.1
2,547,255	+				+0.9
2,547,256	-				+0.1
2,547,303	-				-0.5
2,547,303	-				-1.1
2,547,354	-				+0.1
2,547,563	+		Pf1N1B4_2234	0.32	+1.7
2,547,564	-		Pf1N1B4_2234	0.32	-1.3
2,547,691	+		Pf1N1B4_2234	0.47	-0.1
2,547,692	-		Pf1N1B4_2234	0.47	+0.4
2,547,879	+		Pf1N1B4_2234	0.70	-0.0
2,547,879	+		Pf1N1B4_2234	0.70	-0.3