Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2117

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,429,048	-				-2.5
2,429,072	-				-0.6
2,429,083	-				+1.3
2,429,115	-				-0.3
2,429,183	-				-1.0
2,429,183	-				-0.1
2,429,183	-				+0.4
2,429,216	-				-0.6
2,429,244	+				-0.8
2,429,244	+				-1.1
2,429,244	+				+1.6
2,429,245	-				-0.0
2,429,245	-				-0.4
2,429,245	-				-0.4
2,429,245	-				+1.1
2,429,246	+				-0.6
2,429,246	+				-0.7
2,429,247	-				-1.8
2,429,247	-				-0.3
2,429,247	-				-1.5
2,429,247	-				-0.0
2,429,247	-				-2.4
2,429,279	+				-2.4
2,429,279	+				-2.6
2,429,279	+				-1.1
2,429,279	+				-1.3
2,429,279	+				-1.5
2,429,279	+				-2.0
2,429,279	+				-1.2
2,429,279	+				-0.9
2,429,279	+				+1.3
2,429,280	-				-1.4
2,429,280	-				+1.3
2,429,280	-				+0.4
2,429,280	-				-0.3
2,429,280	-				-1.6
2,429,280	-				+0.5
2,429,280	-				-1.0
2,429,280	-				-3.0
2,429,280	-				-1.5
2,429,280	-				-0.6
2,429,286	+				-2.2
2,429,286	+				-0.9
2,429,287	-				-0.8
2,429,347	+				-1.2
2,429,347	+				+0.6
2,429,347	+				-1.3
2,429,347	+				-1.5
2,429,347	+				-0.5
2,429,347	+				-0.4
2,429,347	+				+0.4
2,429,347	+				-1.7
2,429,348	-				+1.3
2,429,348	-				+0.3
2,429,348	-				-0.6
2,429,348	-				-1.9
2,429,348	-				-1.9
2,429,348	-				-1.8
2,429,348	-				-0.7
2,429,348	-				-1.3
2,429,348	-				-3.5
2,429,348	-				-1.4
2,429,348	-				-2.8
2,429,348	-				+0.4
2,429,348	-				-0.5
2,429,348	-				-1.9
2,429,372	+		Pf1N1B4_2117	0.12	-0.3
2,429,372	+		Pf1N1B4_2117	0.12	+0.7
2,429,372	+		Pf1N1B4_2117	0.12	+0.0
2,429,372	+		Pf1N1B4_2117	0.12	+0.1
2,429,372	+		Pf1N1B4_2117	0.12	-1.1
2,429,391	+		Pf1N1B4_2117	0.14	-1.3
2,429,391	+		Pf1N1B4_2117	0.14	-1.9
2,429,391	+		Pf1N1B4_2117	0.14	-1.8
2,429,392	-		Pf1N1B4_2117	0.15	-0.4
2,429,392	-		Pf1N1B4_2117	0.15	-0.0
2,429,476	+		Pf1N1B4_2117	0.26	-3.9
2,429,477	-		Pf1N1B4_2117	0.26	-0.5
2,429,509	-		Pf1N1B4_2117	0.31	-2.9
2,429,547	+		Pf1N1B4_2117	0.36	-0.9
2,429,547	+		Pf1N1B4_2117	0.36	-2.7
2,429,548	-		Pf1N1B4_2117	0.36	-1.2
2,429,548	-		Pf1N1B4_2117	0.36	-2.2
2,429,548	-		Pf1N1B4_2117	0.36	-2.2
2,429,626	+		Pf1N1B4_2117	0.47	-1.6
2,429,626	+		Pf1N1B4_2117	0.47	-1.9
2,429,626	+		Pf1N1B4_2117	0.47	-0.4
2,429,626	+		Pf1N1B4_2117	0.47	-1.9
2,429,626	+		Pf1N1B4_2117	0.47	-1.7
2,429,626	+		Pf1N1B4_2117	0.47	-1.9
2,429,626	+		Pf1N1B4_2117	0.47	-2.1
2,429,627	-		Pf1N1B4_2117	0.47	-3.0
2,429,627	-		Pf1N1B4_2117	0.47	-0.3
2,429,680	-		Pf1N1B4_2117	0.54	+0.7
2,429,791	+		Pf1N1B4_2117	0.70	-0.9
2,429,791	+		Pf1N1B4_2117	0.70	+0.4
2,429,791	+		Pf1N1B4_2117	0.70	-1.4
2,429,791	+		Pf1N1B4_2117	0.70	-1.5
2,429,791	+		Pf1N1B4_2117	0.70	-0.1
2,429,791	+		Pf1N1B4_2117	0.70	-1.5
2,429,791	+		Pf1N1B4_2117	0.70	-0.9
2,429,791	+		Pf1N1B4_2117	0.70	-2.4
2,429,791	+		Pf1N1B4_2117	0.70	-0.7
2,429,791	+		Pf1N1B4_2117	0.70	-2.0
2,429,791	+		Pf1N1B4_2117	0.70	-0.4
2,429,791	+		Pf1N1B4_2117	0.70	-0.6
2,429,791	+		Pf1N1B4_2117	0.70	-2.2
2,429,791	+		Pf1N1B4_2117	0.70	-2.0
2,429,791	+		Pf1N1B4_2117	0.70	-1.4
2,429,791	+		Pf1N1B4_2117	0.70	-1.1
2,429,791	+		Pf1N1B4_2117	0.70	-0.9
2,429,791	+		Pf1N1B4_2117	0.70	-1.9
2,429,791	+		Pf1N1B4_2117	0.70	-0.8
2,429,792	-		Pf1N1B4_2117	0.70	-1.1
2,429,792	-		Pf1N1B4_2117	0.70	+1.4
2,429,792	-		Pf1N1B4_2117	0.70	+0.3
2,429,792	-		Pf1N1B4_2117	0.70	-0.0
2,429,792	-		Pf1N1B4_2117	0.70	-3.0
2,429,792	-		Pf1N1B4_2117	0.70	+0.4
2,429,792	-		Pf1N1B4_2117	0.70	-2.5
2,429,792	-		Pf1N1B4_2117	0.70	-1.0
2,429,792	-		Pf1N1B4_2117	0.70	-1.1
2,429,792	-		Pf1N1B4_2117	0.70	-0.3
2,429,792	-		Pf1N1B4_2117	0.70	+0.2
2,429,792	-		Pf1N1B4_2117	0.70	-1.3
2,429,792	-		Pf1N1B4_2117	0.70	-0.6
2,429,792	-		Pf1N1B4_2117	0.70	-2.5
2,429,821	+		Pf1N1B4_2117	0.74	-1.0
2,429,821	+		Pf1N1B4_2117	0.74	-1.4
2,429,821	+		Pf1N1B4_2117	0.74	-0.2
2,429,822	-		Pf1N1B4_2117	0.74	-0.3
2,429,822	-		Pf1N1B4_2117	0.74	-1.2
2,429,891	+		Pf1N1B4_2117	0.84	-0.8
2,429,891	+		Pf1N1B4_2117	0.84	-1.3
2,429,891	+		Pf1N1B4_2117	0.84	-3.6
2,429,891	+		Pf1N1B4_2117	0.84	-1.5
2,429,891	+		Pf1N1B4_2117	0.84	-1.0
2,429,891	+		Pf1N1B4_2117	0.84	-1.4
2,429,891	+		Pf1N1B4_2117	0.84	-1.7
2,429,892	-				+3.9
2,429,892	-		Pf1N1B4_2117	0.84	-0.3
2,429,892	-		Pf1N1B4_2117	0.84	-1.3
2,429,892	-		Pf1N1B4_2117	0.84	-0.9
2,429,892	-		Pf1N1B4_2117	0.84	-0.8
2,429,892	-				+2.3
2,430,405	+				-0.9
2,430,405	+				-0.6
2,430,405	+				-0.0
2,430,406	+				-0.3
2,430,406	-				+1.8
2,430,406	-				+0.4
2,430,520	+				-1.5
2,430,520	+				-0.4
2,430,574	+				-2.5
2,430,575	-				-1.0
2,430,583	+				-0.6
2,430,583	+				-2.2
2,430,583	+				-1.4
2,430,583	+				-0.4
2,430,583	+				-2.4
2,430,583	+				-1.1
2,430,583	+				-1.1
2,430,583	+				-1.6
2,430,583	+				-0.4
2,430,583	+				+0.2
2,430,583	+				+0.4
2,430,583	+				-1.7
2,430,584	-				-1.1
2,430,584	-				-1.7
2,430,584	-				-1.6
2,430,584	-				-2.1
2,430,584	-				-0.1
2,430,584	-				-0.9
2,430,584	-				-0.8
2,430,584	-				+0.1
2,430,584	-				-1.2
2,430,584	-				-0.4
2,430,584	-				-1.3
2,430,584	-				+0.4
2,430,605	-				-0.3
2,430,761	-		Pf1N1B4_2119	0.23	-1.3