Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2028

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,314,331	+				-0.7
2,314,455	+				+1.2
2,314,455	+				+1.1
2,314,455	+				-1.8
2,314,455	+				-0.3
2,314,455	+				+1.6
2,314,455	+				-1.0
2,314,455	+				-1.0
2,314,455	+				-0.3
2,314,456	-				+0.4
2,314,456	-				-0.0
2,314,484	+				-2.0
2,314,484	+				-0.5
2,314,506	-				+1.6
2,314,534	+				+0.3
2,314,535	-				-0.3
2,314,535	-				+1.6
2,314,551	+				+0.5
2,314,551	+				+0.3
2,314,551	+				+0.9
2,314,551	+				+1.9
2,314,552	-				+1.1
2,314,552	-				-1.8
2,314,553	+				-0.1
2,314,553	+				+0.7
2,314,553	+				+0.6
2,314,553	+				+1.3
2,314,553	+				-0.3
2,314,587	+				+0.7
2,314,594	+				+1.4
2,315,763	+		Pf1N1B4_2028	0.54	+0.9
2,316,255	+				-0.7
2,316,255	+				+0.5
2,316,256	-				-1.3
2,316,336	+				+1.7
2,316,337	-				-1.1
2,316,337	-				+1.1
2,316,356	+				-0.0
2,316,356	+				+0.7
2,316,356	+				-0.4
2,316,414	-				-1.0
2,316,422	-				-0.5
2,316,478	+				+0.4
2,316,478	+				+0.0
2,316,478	+				+0.1
2,316,478	+				-0.3
2,316,478	+				-0.3
2,316,478	+				+1.3
2,316,478	+				+1.0
2,316,478	+				-1.3
2,316,478	+				+0.7
2,316,478	+				+1.6
2,316,478	+				+0.6
2,316,679	-		Pf1N1B4_2029	0.62	-1.5
2,316,679	-		Pf1N1B4_2029	0.62	+0.0
2,316,730	+		Pf1N1B4_2029	0.83	+0.5
2,316,744	+		Pf1N1B4_2029	0.88	+2.6
2,316,744	+		Pf1N1B4_2029	0.88	-1.8
2,316,744	+		Pf1N1B4_2029	0.88	+1.7
2,316,745	-		Pf1N1B4_2029	0.88	-1.3
2,316,813	-				+0.1
2,316,813	-				+2.3
2,316,813	-				-1.1
2,316,813	-				+1.9
2,316,813	-				-0.0
2,317,071	+		Pf1N1B4_2030	0.44	+0.1
2,317,071	+		Pf1N1B4_2030	0.44	+0.3
2,317,071	+		Pf1N1B4_2030	0.44	+0.8
2,317,071	+		Pf1N1B4_2030	0.44	-0.3
2,317,071	+		Pf1N1B4_2030	0.44	-2.0
2,317,071	+		Pf1N1B4_2030	0.44	-2.1
2,317,072	-		Pf1N1B4_2030	0.44	+1.7
2,317,072	-		Pf1N1B4_2030	0.44	+1.3
2,317,072	-		Pf1N1B4_2030	0.44	-1.4
2,317,072	-		Pf1N1B4_2030	0.44	-0.6
2,317,072	-		Pf1N1B4_2030	0.44	-1.9
2,317,072	-		Pf1N1B4_2030	0.44	-0.7
2,317,072	-		Pf1N1B4_2030	0.44	+0.8